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L2_047_000M1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 363 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_3_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..281
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74248.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_3_2
unknown

Not on your lists

356..472
DNA (117bp) protein (39aa)

This feature has no annotations

L2_047_000M1_scaffold_3_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

451..1260
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C964_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74247.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_3_4
Coriobacteriaceae bacterium BV3Ac1, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1570..2838
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Coriobacteriaceae bacterium BV3Ac1 RepID=U2U3M4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:ERL13015.1}; TaxID=1111135 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae.;" source="Coriobacteriaceae bacterium BV3Ac1.;"
hypothetical protein
L2_047_000M1_scaffold_3_5
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2835..4013
DNA (1179bp) protein (393aa)
endonuclease VII n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B527E5
Endonuclease VII {ECO:0000313|EMBL:ETY71424.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
hypothetical protein
L2_047_000M1_scaffold_3_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4010..4405
DNA (396bp) protein (132aa)
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UJN0_RUMA7
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein {ECO:0000313|EMBL:ADU23876.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_047_000M1_scaffold_3_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4603..5418
DNA (816bp) protein (272aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C863_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDD74246.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
plasmid maintenance system antidote protein
L2_047_000M1_scaffold_3_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5528..5797
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8K4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74245.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_3_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5886..7514
DNA (1629bp) protein (543aa)
Protein kinase family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7Y0_9CLOT
Protein kinase family protein {ECO:0000313|EMBL:CDD74244.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_3_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7492..7965
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAD4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74243.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_3_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8121..8477
DNA (357bp) protein (119aa)
Putative transcriptional regulator n=1 Tax=Clostridium sp. CAG:62 RepID=R7C961_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:CDD74242.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
DNA-binding protein
L2_047_000M1_scaffold_3_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8474..9031
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C859_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74241.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_3_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9048..9905
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8J8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74240.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_3_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9934..10890
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7X4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74239.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_3_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11201..12340)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C705_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73861.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
L2_047_000M1_scaffold_3_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12520..13014
DNA (495bp) protein (165aa)
rpoD2; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6)
Sigma-70 region 2 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7D5_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:CDD73860.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_3_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13004..14377
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6S9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73859.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_3_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14523..15122
DNA (600bp) protein (200aa)
TetR family Bacterial regulatory protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C957_9CLOT
TetR family Bacterial regulatory protein {ECO:0000313|EMBL:CDD73858.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
transcriptional regulator, TetR family
L2_047_000M1_scaffold_3_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15137..15547
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73857.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_3_20
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16095..18839
DNA (2745bp) protein (915aa)
two component system histidine kinase/response regulator hybrid protein (EC:2.7.13.3)
hypothetical protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B40182
Uncharacterized protein {ECO:0000313|EMBL:EOS71616.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L2_047_000M1_scaffold_3_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18836..21511
DNA (2676bp) protein (892aa)
two component system histidine kinase (EC:2.7.13.3)
Two component system histidine kinase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7D0_9CLOT
Two component system histidine kinase {ECO:0000313|EMBL:CDD73855.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_3_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21533..22891
DNA (1359bp) protein (453aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6S5_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDD73854.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
putative response regulator receiver protein
L2_047_000M1_scaffold_3_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22866..24404
DNA (1539bp) protein (513aa)
ImpB/mucB/samB family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C954_9CLOT
ImpB/mucB/samB family protein {ECO:0000313|EMBL:CDD73853.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L2_047_000M1_scaffold_3_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24439..24897
DNA (459bp) protein (153aa)
YolD-like protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7Z1_9CLOT
YolD-like protein {ECO:0000313|EMBL:CDD73852.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
YolD-like protein.
L2_047_000M1_scaffold_3_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24875..25405
DNA (531bp) protein (177aa)
Amidases related to nicotinamidase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6Z8_9CLOT
Amidases related to nicotinamidase {ECO:0000313|EMBL:CDD73851.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Amidases related to nicotinamidase
L2_047_000M1_scaffold_3_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25415..27007)
DNA (1593bp) protein (531aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7C6_9CLOT
L2_047_000M1_scaffold_3_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27375..28955)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6S1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73849.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Arylsulfotransferase (ASST).
L2_047_000M1_scaffold_3_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28952..30613)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C949_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73848.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Arylsulfotransferase (ASST).
L2_047_000M1_scaffold_3_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31216..32574
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7Y9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73847.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
putative efflux protein, MATE family
L2_047_000M1_scaffold_3_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32791..34920
DNA (2130bp) protein (710aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6Z3_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD73846.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
Displaying items 1-30 of 363 in total

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