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L2_047_000M1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 156 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_42_1
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1905)
DNA (1905bp) protein (635aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDQ6_9FIRM
L2_047_000M1_scaffold_42_2
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1921..2388)
DNA (468bp) protein (156aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRH1_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
greA1; transcription elongation factor GreA
L2_047_000M1_scaffold_42_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2537..3646
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51861.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_42_4
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3787..4992)
DNA (1206bp) protein (402aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
aspartate kinase, monofunctional class (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP07_9CLOT
L2_047_000M1_scaffold_42_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5012..6229)
DNA (1218bp) protein (406aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Clostridium sp. CAG:217 RepID=R6INE3_9CLOT
L2_047_000M1_scaffold_42_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6280..6696)
DNA (417bp) protein (139aa)
ACT domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZI6_9CLOT
ACT domain protein {ECO:0000313|EMBL:CDB51864.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
amino acid-binding ACT protein
L2_047_000M1_scaffold_42_7
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6912..8138
DNA (1227bp) protein (409aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRH7_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CDB51865.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
membrane protein
L2_047_000M1_scaffold_42_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8535..8783)
DNA (249bp) protein (83aa)
Copper chaperone n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2C2_9CLOT
Copper chaperone {ECO:0000313|EMBL:CDB51866.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Copper chaperone
L2_047_000M1_scaffold_42_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8796..8984)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51867.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_42_10
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9005..11530)
DNA (2526bp) protein (842aa)
Ferrous iron transporter FeoB n=1 Tax=Clostridium sp. CAG:217 RepID=R6INE7_9CLOT
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CDB51868.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ferrous iron transporter FeoB
L2_047_000M1_scaffold_42_11
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11620..11841)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51869.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Fe2+ transport system protein A
L2_047_000M1_scaffold_42_12
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11899..12111)
DNA (213bp) protein (71aa)
Fe2+ transport system protein A n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRI3_9CLOT
Fe2+ transport system protein A {ECO:0000313|EMBL:CDB51870.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Fe2+ transport system protein A
L2_047_000M1_scaffold_42_13
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12316..12711
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2C7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51871.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
DtxR family iron (metal) dependent repressor
L2_047_000M1_scaffold_42_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12864..14144)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51872.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Fibronectin type III domain./Regulator of chromosome condensation (RCC1) repeat.
L2_047_000M1_scaffold_42_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14290..15189)
DNA (900bp) protein (300aa)
Inosose dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; EC=4.2.1.44 {ECO:0000256|HAMAP-Rule:MF_01672};; 2-keto-myo-inositol dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
2-keto-myo-inositol dehydratase (EC:4.2.1.44)
Inosose dehydratase n=1 Tax=Clostridium sp. CAG:217 RepID=R6INF1_9CLOT
L2_047_000M1_scaffold_42_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15202..17055)
DNA (1854bp) protein (618aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC:3.7.1.-)
3D-(3 5/4)-trihydroxycyclohexane-1 2-dione hydrolase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZJ6_9CLOT
3D-(3 5/4)-trihydroxycyclohexane-1 2-dione hydrolase {ECO:0000313|EMBL:CDB51874.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_42_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17081..18094)
DNA (1014bp) protein (338aa)
Inositol 2-dehydrogenase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRI8_9CLOT
Inositol 2-dehydrogenase {ECO:0000313|EMBL:CDB51875.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Inositol 2-dehydrogenase
L2_047_000M1_scaffold_42_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18390..18635
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51876.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_42_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18659..21013
DNA (2355bp) protein (785aa)
Putative alpha-N-acetylgalactosaminidase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP21_9CLOT
Putative alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:CDB51877.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
sialidase-like protein
L2_047_000M1_scaffold_42_20
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21016..21573
DNA (558bp) protein (186aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6INF6_9CLOT
L2_047_000M1_scaffold_42_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21589..22374
DNA (786bp) protein (262aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZK2_9CLOT
L2_047_000M1_scaffold_42_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22479..22901)
DNA (423bp) protein (141aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZL5_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_42_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22926..24314)
DNA (1389bp) protein (463aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ATP synthase subunit beta n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRK6_9CLOT
F-type H+-transporting ATPase subunit beta
L2_047_000M1_scaffold_42_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24332..25228)
DNA (897bp) protein (299aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2F1_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_42_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25221..26732)
DNA (1512bp) protein (504aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ATP synthase subunit alpha n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP46_9CLOT
ATP synthase F1, alpha subunit
L2_047_000M1_scaffold_42_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26732..27241)
DNA (510bp) protein (170aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Clostridium sp. CAG:217 RepID=R6INH5_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_42_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27238..27729)
DNA (492bp) protein (164aa)
ATP synthase subunit b n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZL9_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ATP synthase F0 subunit B
L2_047_000M1_scaffold_42_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27766..27984)
DNA (219bp) protein (73aa)
atpE; ATP synthase FO, subunit C (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRL0_9CLOT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_42_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28017..28724)
DNA (708bp) protein (236aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2F5_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_42_30
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29086..30102
DNA (1017bp) protein (339aa)
UDP-glucose-4-epimerase (EC:5.1.3.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51902.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Displaying items 1-30 of 156 in total

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