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L2_047_000M1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_47_1
unknown

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

L2_047_000M1_scaffold_47_2
unknown

Not on your lists

comp(536..1045)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E890AB
L2_047_000M1_scaffold_47_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1344..2000)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FDF398
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CDD25909.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L2_047_000M1_scaffold_47_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2010..3005)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003140C20
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBK64128.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_47_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3096..3869)
DNA (774bp) protein (258aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
5'-nucleotidase, exopolyphosphatase, 3'-nucleotidase (EC:3.1.3.5 3.1.3.6 3.6.1.11)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036B3214
L2_047_000M1_scaffold_47_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4799..5863
DNA (1065bp) protein (355aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D8C9D0
L2_047_000M1_scaffold_47_7
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6427..7155
DNA (729bp) protein (243aa)
transcriptional regulator n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F8D878
Probable transcriptional regulatory protein ALIPUT_00581 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
YebC/PmpR family DNA-binding regulatory protein
L2_047_000M1_scaffold_47_8
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7233..8141
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003013856
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63190.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_47_9
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8223..10559)
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000315807E
TonB-dependent receptor {ECO:0000313|EMBL:EDS02895.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
outer membrane receptor for ferrienterochelin and colicins
L2_047_000M1_scaffold_47_10
unknown

Not on your lists

comp(10647..10970)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000364CEC1
L2_047_000M1_scaffold_47_11
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11087..11959)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003049E4C
conserved protein of unknown function cotranscribed with Bmr (bmrU)
Uncharacterized protein {ECO:0000313|EMBL:CCZ97284.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_47_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11967..13007)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000318B12F
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:CDD26250.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L2_047_000M1_scaffold_47_13
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


13423..13695
DNA (273bp) protein (91aa)
30S ribosomal protein S15 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000314973B
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
SSU ribosomal protein S15P
L2_047_000M1_scaffold_47_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13784..15994
DNA (2211bp) protein (737aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
polynucleotide phosphorylase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003753C9B
polyribonucleotide nucleotidyltransferase
L2_047_000M1_scaffold_47_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16231..17982
DNA (1752bp) protein (584aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00038024F4
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDE63482.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L2_047_000M1_scaffold_47_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18132..19010
DNA (879bp) protein (293aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
deoxyribose-phosphate aldolase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E6D7F8
deoxyribose-phosphate aldolase
L2_047_000M1_scaffold_47_17
unknown

Not on your lists

19401..19961
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000377020E
L2_047_000M1_scaffold_47_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19993..20838
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030DB707
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64457.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_47_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20918..21718)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003093723
Uncharacterized protein {ECO:0000313|EMBL:CDD24820.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
S1/P1 Nuclease
L2_047_000M1_scaffold_47_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21715..22770)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F4883A
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CDD25796.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Mg-chelatase subunit ChlD
L2_047_000M1_scaffold_47_21
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22770..23756)
DNA (987bp) protein (329aa)
aerotolerance protein BatA n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D551C5
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CCZ95684.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Mg-chelatase subunit ChlD
L2_047_000M1_scaffold_47_22
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23903..24667)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D4D0CC
Tetratricopeptide repeat {ECO:0000313|EMBL:CCZ95682.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L2_047_000M1_scaffold_47_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24660..25658)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F2B9E5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64065.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_47_24
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25655..26539)
DNA (885bp) protein (295aa)
von Willebrand factor n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DACD6E
Uncharacterized conserved protein (Some members contain a von Willebrand factor type A (VWA) domain) {ECO:0000313|EMBL:CDC95625.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
L2_047_000M1_scaffold_47_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26544..27542)
DNA (999bp) protein (333aa)
ATPase AAA n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E965BE
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CDE62793.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
MoxR-like ATPase
L2_047_000M1_scaffold_47_26
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27791..29263
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003820973
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76416.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_47_27
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29522..30007)
DNA (486bp) protein (162aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D73857
ferritin-like protein
L2_047_000M1_scaffold_47_28
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


30419..30652
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003769B15
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
50S ribosomal protein L28
L2_047_000M1_scaffold_47_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


30666..30848
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DB5A8F
LSU ribosomal protein L33P
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_47_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30858..31016
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F34912
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78327.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying items 1-30 of 170 in total

View Taxonomy