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L2_047_000M1_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_53_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..373
DNA (372bp) protein (124aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PGT4_9FIRM
Signal transduction histidine kinase
L2_047_000M1_scaffold_53_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(501..749)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BXD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19447.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_047_000M1_scaffold_53_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1001..1180)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MRQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99472.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L2_047_000M1_scaffold_53_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1203..1622
DNA (420bp) protein (140aa)
Plasmid recombination enzyme n=2 Tax=root RepID=R5DR37_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:CCX82633.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Plasmid recombination enzyme.
L2_047_000M1_scaffold_53_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1647..1883
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03655.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_047_000M1_scaffold_53_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1934..3448)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZNW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88556.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L2_047_000M1_scaffold_53_7
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3472..4590)
DNA (1119bp) protein (373aa)
Type I restriction modification DNA specificity protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YXQ0_AEQSU
phosphoribosylglycinamide formyltransferase
Type I restriction modification DNA specificity protein {ECO:0000313|EMBL:AFL81768.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
L2_047_000M1_scaffold_53_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4587..6701)
DNA (2115bp) protein (705aa)
mod; N-6 DNA methylase (EC:2.1.1.72)
N-6 DNA methylase {ECO:0000313|EMBL:CCO06171.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCO06171.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Bacillus cereus BAG3X2-2 RepID=J7W6A4_BACCE
L2_047_000M1_scaffold_53_9
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6646..7542)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MRD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02248.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Domain of unknown function (DUF1814).
L2_047_000M1_scaffold_53_10
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7535..8140)
DNA (606bp) protein (202aa)
Putative abortive infection protein AbiGI n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NWY4_9FIRM
Putative abortive infection protein AbiGI {ECO:0000313|EMBL:CDC02247.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L2_047_000M1_scaffold_53_11
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8500..8739
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF92843.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
L2_047_000M1_scaffold_53_12
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8907..10292
DNA (1386bp) protein (462aa)
Predicted transcriptional regulators n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LD04_RUMC1
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL17499.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L2_047_000M1_scaffold_53_13
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10556..11284)
DNA (729bp) protein (243aa)
TatD related DNase family protein n=10 Tax=Clostridium difficile RepID=T3EQG1_CLODI
Hydrolase {ECO:0000313|EMBL:EWH23063.1}; TaxID=1348578 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus licheniformis S 16.;"
hypothetical protein
L2_047_000M1_scaffold_53_14
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11286..12662)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LMA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFU77003.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
ATPase
L2_047_000M1_scaffold_53_15
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12655..13332)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LMA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFU77002.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
L2_047_000M1_scaffold_53_16
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13336..15210)
DNA (1875bp) protein (625aa)
KAP family P-loop domain protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LMA6_9FIRM
KAP family P-loop domain protein {ECO:0000313|EMBL:EFU77001.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
hypothetical protein
L2_047_000M1_scaffold_53_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15378..15728)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L968_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16163.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_53_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15731..15907)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L969_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16164.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_53_19
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16428..16823)
DNA (396bp) protein (132aa)
Putative viral replication protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6I8_9FIRM
Putative viral replication protein.
Putative viral replication protein {ECO:0000313|EMBL:CBL15233.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_53_20
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16995..17990)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6H3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15218.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_53_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17980..18603)
DNA (624bp) protein (208aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E354_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX83222.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type multidrug transport system, ATPase component
L2_047_000M1_scaffold_53_22
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18613..19305)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6H1_9FIRM
Protein of unknown function (DUF2705).
Uncharacterized protein {ECO:0000313|EMBL:CBL15216.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_53_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19292..20047)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83228.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_53_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20034..20795)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6G9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15214.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_53_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21051..22835)
DNA (1785bp) protein (595aa)
adenine deaminase (EC:3.5.4.2)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Adenine deaminase n=2 Tax=root RepID=D4L6G7_9FIRM
L2_047_000M1_scaffold_53_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23009..24133
DNA (1125bp) protein (375aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Glycerol dehydrogenase and related enzymes {ECO:0000313|EMBL:CBL15211.1}; EC=1.1.1.6 {ECO:0000313|EMBL:CBL15211.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Glycerol dehydrogenase and related enzymes n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6G6_9FIRM
L2_047_000M1_scaffold_53_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24430..25800)
DNA (1371bp) protein (457aa)
Na+/H+-dicarboxylate symporters n=2 Tax=root RepID=D4L6G5_9FIRM
Na+/H+-dicarboxylate symporters
Na+/H+-dicarboxylate symporters {ECO:0000313|EMBL:CBL15210.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_53_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26204..26956)
DNA (753bp) protein (251aa)
Transcriptional regulators of sugar metabolism n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L6G4_9FIRM
Transcriptional regulators of sugar metabolism
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CBL15209.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_53_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27098..28090)
DNA (993bp) protein (331aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DST5_9FIRM
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) {ECO:0000313|EMBL:CCX83253.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L2_047_000M1_scaffold_53_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28182..29168)
DNA (987bp) protein (329aa)
Sugar kinases ribokinase family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWF4_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CCX83254.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Sugar kinases, ribokinase family
Displaying items 1-30 of 173 in total

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