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L2_047_000M1_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_54_1
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(297..2186)
DNA (1890bp) protein (630aa)
UvrABC system protein C n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H4N3_BACT4
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
uvrC; excinuclease ABC subunit C
L2_047_000M1_scaffold_54_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2202..2732)
DNA (531bp) protein (177aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Adenine phosphoribosyltransferase n=3 Tax=Bacteroides RepID=APT_BACTN
L2_047_000M1_scaffold_54_3
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2783..4669)
DNA (1887bp) protein (629aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=3 Tax=Bacteroides RepID=MNMG_BACTN
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L2_047_000M1_scaffold_54_4
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5501..6073
DNA (573bp) protein (191aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroides RepID=D7IHE5_9BACE
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI03066.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
RNA polymerase ECF-type sigma factor
L2_047_000M1_scaffold_54_5
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6671..6772)
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7KS41_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE79175.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L2_047_000M1_scaffold_54_6
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6775..8046
DNA (1272bp) protein (424aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7KW54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE79172.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
anti-sigma factor
L2_047_000M1_scaffold_54_7
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8091..11420
DNA (3330bp) protein (1110aa)
SusC homolog n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A2N4_BACTN
hypothetical protein
SusC homolog {ECO:0000313|EMBL:AAO78377.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L2_047_000M1_scaffold_54_8
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11443..12912
DNA (1470bp) protein (490aa)
SusD homolog n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A2N3_BACTN
hypothetical protein
SusD homolog {ECO:0000313|EMBL:AAO78378.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L2_047_000M1_scaffold_54_9
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12939..13649
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6UWR2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC88925.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
L2_047_000M1_scaffold_54_10
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13669..15300
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6VA56_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC88926.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
hypothetical protein
L2_047_000M1_scaffold_54_11
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15321..17948
DNA (2628bp) protein (876aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IIS2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES69071.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L2_047_000M1_scaffold_54_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17957..20563
DNA (2607bp) protein (869aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H412_BACT4
Uncharacterized protein {ECO:0000313|EMBL:AAO78382.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
hypothetical protein
L2_047_000M1_scaffold_54_13
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20799..21395
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IIS0_9BACE
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EES69069.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
RNA polymerase ECF-type sigma factor
L2_047_000M1_scaffold_54_14
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21594..22778
DNA (1185bp) protein (395aa)
Anti-sigma factor n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7IHF4_9BACE
Anti-sigma factor {ECO:0000313|EMBL:EFI03075.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
anti-sigma factor
L2_047_000M1_scaffold_54_15
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22812..26360
DNA (3549bp) protein (1183aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IIR8_9BACE
hypothetical protein
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EES69067.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L2_047_000M1_scaffold_54_16
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26367..27839
DNA (1473bp) protein (491aa)
RagB/SusD domain-containing protein n=2 Tax=Bacteroides RepID=D7IHF6_9BACE
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EFI03077.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
hypothetical protein
L2_047_000M1_scaffold_54_17
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27846..28745
DNA (900bp) protein (300aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q8A2M4_BACTN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI03078.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L2_047_000M1_scaffold_54_18
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28765..31314
DNA (2550bp) protein (850aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=Q8A2M3_BACTN
Uncharacterized protein {ECO:0000313|EMBL:AAO78388.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
hypothetical protein
L2_047_000M1_scaffold_54_19
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31408..31821)
DNA (414bp) protein (138aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
Endoribonuclease YbeY n=3 Tax=Bacteroides RepID=C6IIR4_9BACE
hypothetical protein
L2_047_000M1_scaffold_54_20
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31837..33069)
DNA (1233bp) protein (411aa)
Putative spore maturation protein A/B n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KRW3_9BACE
Putative spore maturation protein A/B {ECO:0000313|EMBL:CDE79149.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
L2_047_000M1_scaffold_54_21
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33592..34713
DNA (1122bp) protein (374aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Bacteroides faecis CAG:32 RepID=R6UWT7_9BACE
L2_047_000M1_scaffold_54_22
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34820..35587
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6IIR1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES69060.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L2_047_000M1_scaffold_54_23
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35623..37071
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IIR0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES69059.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
polysaccharide biosynthesis protein
L2_047_000M1_scaffold_54_24
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37074..38429
DNA (1356bp) protein (452aa)
TIGR00341 family protein n=5 Tax=Bacteroides RepID=C6IIQ9_9BACE
hypothetical protein
Membrane protein {ECO:0000313|EMBL:EFI03085.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L2_047_000M1_scaffold_54_25
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38476..40617
DNA (2142bp) protein (714aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IIQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR98754.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L2_047_000M1_scaffold_54_26
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40649..41515)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H4Q4_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR98755.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L2_047_000M1_scaffold_54_27
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41799..44003
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H424_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR98756.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L2_047_000M1_scaffold_54_28
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44096..45871)
DNA (1776bp) protein (592aa)
Beta-glucuronidase n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A2L3_BACTN
Beta-glucuronidase {ECO:0000313|EMBL:AAO78398.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
beta-glucuronidase
L2_047_000M1_scaffold_54_29
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46139..50404
DNA (4266bp) protein (1422aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H4D4_BACT4
beta-galactosidase
L2_047_000M1_scaffold_54_30
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50507..52459)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IIQ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES69055.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
alpha-glucosidase
Displaying items 1-30 of 96 in total

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