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L2_047_000M1_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_75_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(60..1304)
DNA (1245bp) protein (415aa)
Tat pathway signal sequence domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B6M9_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEC97922.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_75_2
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1312..3135)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DFZ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77699.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
pyridine nucleotide-disulfide oxidoreductase
L2_047_000M1_scaffold_75_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3206..4891)
DNA (1686bp) protein (562aa)
SusD family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B6M6_9PORP
SusD family protein {ECO:0000313|EMBL:EEC97919.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
RagB/SusD domain-containing protein
L2_047_000M1_scaffold_75_4
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4910..8161)
DNA (3252bp) protein (1084aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides RepID=B7B6M5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76760.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
TonB-dependent receptor plug
L2_047_000M1_scaffold_75_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8345..9394)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YGL6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12727.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
anti-sigma factor
L2_047_000M1_scaffold_75_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9451..9933)
DNA (483bp) protein (161aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=B7B6M3_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN11317.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RNA polymerase ECF-type sigma factor
L2_047_000M1_scaffold_75_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10478..11065
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7BHC8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11318.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
membrane protein
L2_047_000M1_scaffold_75_8
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11242..11820)
DNA (579bp) protein (193aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Parabacteroides RepID=B7B6L3_9PORP
hypothetical protein
L2_047_000M1_scaffold_75_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11825..13369)
DNA (1545bp) protein (515aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZJ80_9PORP
L2_047_000M1_scaffold_75_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13782..16922)
DNA (3141bp) protein (1047aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZJE9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11611.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_047_000M1_scaffold_75_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17593..18936
DNA (1344bp) protein (448aa)
Uncharacterized protein n=6 Tax=root RepID=D2EZR8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82794.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Predicted ATPase (AAA+ superfamily)
L2_047_000M1_scaffold_75_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19190..20533)
DNA (1344bp) protein (448aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B6K9_9PORP
alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase
L2_047_000M1_scaffold_75_13
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20544..20924)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YCZ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76773.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_047_000M1_scaffold_75_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20944..21363)
DNA (420bp) protein (140aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B6K7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC97950.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_75_15
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21499..22200)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z6Z2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76775.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_75_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22403..23977
DNA (1575bp) protein (525aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=3 Tax=Parabacteroides RepID=B7B6K5_9PORP
L2_047_000M1_scaffold_75_17
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24086..25627
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DJ08_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76777.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
secreted sulfatase ydeN
L2_047_000M1_scaffold_75_18
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25635..26348)
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YCZ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76778.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_75_19
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26425..31263)
DNA (4839bp) protein (1613aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DDC1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76779.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
acriflavin resistance protein
L2_047_000M1_scaffold_75_20
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31260..34430)
DNA (3171bp) protein (1057aa)
RND transporter, HAE1/HME family, permease protein n=3 Tax=Parabacteroides RepID=B7B6K1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76780.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
RND transporter, Hydrophobe/Amphiphile Efflux-1 (HAE1)/Heavy Metal Efflux (HME) family, permease protein
L2_047_000M1_scaffold_75_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34427..35479)
DNA (1053bp) protein (351aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Parabacteroides RepID=B7B6K0_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKN11330.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
cation efflux system outer membrane protein
L2_047_000M1_scaffold_75_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35487..36986)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZIQ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11331.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
outer membrane lipoprotein silC
L2_047_000M1_scaffold_75_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37000..40272)
DNA (3273bp) protein (1091aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YD04_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11332.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
xanthan lyase XalB
L2_047_000M1_scaffold_75_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40289..41182)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A6P1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11333.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
ABC transporter ATP-binding protein
L2_047_000M1_scaffold_75_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41293..41871)
DNA (579bp) protein (193aa)
Rubrerythrin n=3 Tax=Parabacteroides RepID=B7B6J6_9PORP
Rubrerythrin {ECO:0000313|EMBL:EEC97939.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
rubrerythrin
L2_047_000M1_scaffold_75_26
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42551..43081
DNA (531bp) protein (177aa)
RNA methyltransferase, TrmH family n=3 Tax=Parabacteroides RepID=B7B6J4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76786.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
tRNA/rRNA methyltransferase
L2_047_000M1_scaffold_75_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43073..43678)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZIQ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11336.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_75_28
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43999..44178
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7B6J2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76788.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_75_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44213..45019
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A6P5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11338.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_75_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45032..47059
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z705_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11339.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
Displaying items 1-30 of 100 in total

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