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L2_047_000M1_scaffold_89

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_89_1
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..149)
DNA (147bp) protein (49aa)
SEFIR domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF88_CLOSV
SEFIR domain protein {ECO:0000313|EMBL:EDS06766.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
protein-transmembrane prediction
L2_047_000M1_scaffold_89_2
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(192..836)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IQM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53618.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L2_047_000M1_scaffold_89_3
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(839..2101)
DNA (1263bp) protein (421aa)
Putative abortive infection protein n=1 Tax=Roseburia sp. CAG:303 PF9_9FIRM">RepID=R7IPF9_9FIRM
Putative abortive infection protein {ECO:0000313|EMBL:CDE53619.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Predicted ATPases
L2_047_000M1_scaffold_89_4
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2359..2601)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5JWY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY58935.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
L2_047_000M1_scaffold_89_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3022..5676)
DNA (2655bp) protein (885aa)
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK78360.1}; EC=3.1.21.5 {ECO:0000313|EMBL:CBK78360.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
hypothetical protein (EC:3.1.21.5)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKY6_CLOSC
L2_047_000M1_scaffold_89_6
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5680..7641)
DNA (1962bp) protein (654aa)
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:EMT39263.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EMT39263.1};; TaxID=1198630 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter thermohydrosulfuricus WC1.;"
Adenine specific DNA methylase Mod n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CY57_THETY
DNA methylase N-4/N-6 domain-containing protein
L2_047_000M1_scaffold_89_7
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7682..7927)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:632 RepID=R5K1H1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY58939.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
hypothetical protein
L2_047_000M1_scaffold_89_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7940..9595)
DNA (1656bp) protein (552aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10600.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L2_047_000M1_scaffold_89_9
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9784..10047)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10601.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_89_10
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10120..12660)
DNA (2541bp) protein (847aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEM6_9FIRM
hypothetical protein
L2_047_000M1_scaffold_89_11
unknown

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comp(12748..12915)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_047_000M1_scaffold_89_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12955..14016)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NER4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10603.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
trigger factor
L2_047_000M1_scaffold_89_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14226..14582)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAT6_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rplT; 50S ribosomal protein L20
L2_047_000M1_scaffold_89_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14625..14822)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=4 Tax=environmental samples RepID=R5E4I4_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
rpmI; 50S ribosomal protein L35
L2_047_000M1_scaffold_89_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14866..15360)
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDG0_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
translation initiation factor IF-3
L2_047_000M1_scaffold_89_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15610..16875)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10607.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_89_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16978..17985
DNA (1008bp) protein (336aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NER8_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDF10608.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
N-acetylmuramoyl-L-alanine amidase
L2_047_000M1_scaffold_89_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18109..19152)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10609.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L2_047_000M1_scaffold_89_19
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19149..19706)
DNA (558bp) protein (186aa)
RNA polymerase sigma-70 factor ECF subfamily n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCW3_9FIRM
RNA polymerase sigma-70 factor ECF subfamily {ECO:0000313|EMBL:CDF10610.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ECF subfamily RNA polymerase sigma-70 factor
L2_047_000M1_scaffold_89_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19812..20798)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10611.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L2_047_000M1_scaffold_89_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20761..21273)
DNA (513bp) protein (171aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEN9_9FIRM
Dihydrofolate reductase {ECO:0000313|EMBL:CDF10612.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L2_047_000M1_scaffold_89_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21270..22511)
DNA (1242bp) protein (414aa)
GTPase HflX n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NES2_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
GTP-binding protein HflX
L2_047_000M1_scaffold_89_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22594..24312)
DNA (1719bp) protein (573aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAU4_9FIRM
hypothetical protein
L2_047_000M1_scaffold_89_24
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24362..26170)
DNA (1809bp) protein (603aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCX0_9FIRM
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CDF10615.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
glycerophosphoryl diester phosphodiesterase
L2_047_000M1_scaffold_89_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26186..26821)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10616.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_89_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26793..27389)
DNA (597bp) protein (199aa)
Phosphatidylglycerophosphate synthase (EC:2.7.8.5)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10617.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L2_047_000M1_scaffold_89_27
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27490..28743)
DNA (1254bp) protein (418aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NES7_9FIRM
isocitrate dehydrogenase
L2_047_000M1_scaffold_89_28
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29019..30860
DNA (1842bp) protein (614aa)
Asparagine synthetase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NAU8_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CDF10619.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
asparagine synthase
L2_047_000M1_scaffold_89_29
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31084..33366)
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NCX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF10620.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type transport system, involved in lipoprotein release, permease component
L2_047_000M1_scaffold_89_30
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33395..34093)
DNA (699bp) protein (233aa)
ABC transporter ATP-binding protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NDH8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDF10621.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
putative ABC transporter ATP-binding protein MG065
Displaying items 1-30 of 163 in total

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