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L2_047_000M1_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_117_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(123..1256)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9SHK5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY55446.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Predicted permease
L2_047_000M1_scaffold_117_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1277..1876)
DNA (600bp) protein (200aa)
Thymidine kinase (EC:2.7.1.21)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Thymidine kinase n=17 Tax=Bacteroides RepID=D6D850_9BACE
L2_047_000M1_scaffold_117_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2017..2679
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9H737_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY55444.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L2_047_000M1_scaffold_117_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2691..3365
DNA (675bp) protein (225aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9SIA6_BACOV
conserved hypothetical protein TIGR00096
L2_047_000M1_scaffold_117_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3399..4256
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8XZF7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY55442.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L2_047_000M1_scaffold_117_6
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4353..5045
DNA (693bp) protein (231aa)
HAD superfamily hydrolase n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M093_9BACE
HAD superfamily hydrolase {ECO:0000313|EMBL:EGN09388.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
HAD superfamily (subfamily IA) hydrolase, TIGR02254
L2_047_000M1_scaffold_117_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5107..5757
DNA (651bp) protein (217aa)
Integral membrane protein (MarC family) n=3 Tax=Bacteroides RepID=D7K5I8_9BACE
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
conserved hypothetical protein TIGR00427
L2_047_000M1_scaffold_117_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5892..7469)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YGV3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61617.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
arylsulfatase
L2_047_000M1_scaffold_117_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7541..8215)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9SYU5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61616.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L2_047_000M1_scaffold_117_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8235..10076)
DNA (1842bp) protein (614aa)
Putative outer membrane protein n=2 Tax=Bacteroides RepID=D7K5J1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99484.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L2_047_000M1_scaffold_117_11
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10082..13453)
DNA (3372bp) protein (1124aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides sp. D2 RepID=E5CDS1_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EFS33236.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
L2_047_000M1_scaffold_117_12
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13693..14700)
DNA (1008bp) protein (336aa)
Putative anti-sigma factor n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K5J3_9BACE
Putative anti-sigma factor {ECO:0000313|EMBL:EFI37848.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
anti-sigma factor
L2_047_000M1_scaffold_117_13
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14775..15362)
DNA (588bp) protein (196aa)
RNA polymerase sigma factor n=3 Tax=Bacteroides RepID=D7K5J4_9BACE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
RNA polymerase ECF-type sigma factor
L2_047_000M1_scaffold_117_14
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15730..17283)
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K5J5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37850.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L2_047_000M1_scaffold_117_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17300..20488)
DNA (3189bp) protein (1063aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Bacteroides RepID=I9PKE3_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY16906.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L2_047_000M1_scaffold_117_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20938..22110
DNA (1173bp) protein (391aa)
Site-specific recombinase, phage integrase family n=4 Tax=Bacteroides RepID=A7LZ06_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY54710.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Site-specific recombinase XerD
L2_047_000M1_scaffold_117_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22872..25814
DNA (2943bp) protein (981aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LZ04_BACOV
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDO11176.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
TonB-dependent receptor plug
L2_047_000M1_scaffold_117_18
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25834..27246
DNA (1413bp) protein (471aa)
SusD family n=3 Tax=Bacteroides RepID=D6D856_9BACE
SusD family.
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EFI11117.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L2_047_000M1_scaffold_117_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27717..30617
DNA (2901bp) protein (967aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides ovatus CAG:22 RepID=R6J8I8_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY55783.1}; Flags: Fragment;; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L2_047_000M1_scaffold_117_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30637..32091
DNA (1455bp) protein (485aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7LZ08_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF54543.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L2_047_000M1_scaffold_117_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32194..33453
DNA (1260bp) protein (420aa)
GTPase HflX n=7 Tax=Bacteroides RepID=C3R1X8_9BACE
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
GTP-binding protein HflX
L2_047_000M1_scaffold_117_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33546..35537
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9HNW1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61854.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L2_047_000M1_scaffold_117_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35803..37440
DNA (1638bp) protein (546aa)
fumarase (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=6 Tax=Bacteroides RepID=A7LZ12_BACOV
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EDO11184.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L2_047_000M1_scaffold_117_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37599..38693)
DNA (1095bp) protein (365aa)
Pectate lyase n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YHM4_BACOV
Pectate lyase {ECO:0000313|EMBL:EIY61852.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
pectate lyase, PelA/Pel-15E family
L2_047_000M1_scaffold_117_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38843..40186)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9SZJ3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61851.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Outer membrane protein
L2_047_000M1_scaffold_117_26
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40183..43215)
DNA (3033bp) protein (1011aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=2 Tax=Bacteroides RepID=E5CDQ4_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EFS33219.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Cation/multidrug efflux pump
L2_047_000M1_scaffold_117_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43231..44316)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LFK0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM99500.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
RND family efflux transporter, MFP subunit
L2_047_000M1_scaffold_117_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44416..45348)
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=4 Tax=Bacteroides RepID=C3R1Y6_9BACE
L2_047_000M1_scaffold_117_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45448..46008)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=16 Tax=Bacteroides RepID=D6D866_9BACE
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L2_047_000M1_scaffold_117_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46060..46971)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LFK3_BACOV
Predicted permease, DMT superfamily
Uncharacterized protein {ECO:0000313|EMBL:EGM99503.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Displaying items 1-30 of 85 in total

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