ggKbase home page

L2_047_000M1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_142_1
unknown

Not on your lists

105..872
DNA (768bp) protein (256aa)

This feature has no annotations

L2_047_000M1_scaffold_142_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(869..1141)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JQ76_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95245.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_142_3
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1190..2209)
DNA (1020bp) protein (340aa)
Phage integrase SAM-like domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW98_9FIRM
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:EEG93132.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
integrase family protein
L2_047_000M1_scaffold_142_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2199..3188)
DNA (990bp) protein (330aa)
Site-specific recombinase, phage integrase family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW97_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEG93131.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
integrase/recombinase
L2_047_000M1_scaffold_142_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3185..3838)
DNA (654bp) protein (218aa)
Site-specific recombinase, phage integrase family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW96_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEG93130.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
integrase/recombinase
L2_047_000M1_scaffold_142_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3925..4353)
DNA (429bp) protein (143aa)
Site-specific recombinase, phage integrase family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW96_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEG93130.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_142_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4441..8211
DNA (3771bp) protein (1257aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
DNA topoisomerase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E5U2_9FIRM
Topoisomerase IA
L2_047_000M1_scaffold_142_8
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8358..9032
DNA (675bp) protein (225aa)
Putative UDP-N-acetylglucosamine diphosphorylase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6THU3_9FIRM
Putative UDP-N-acetylglucosamine diphosphorylase {ECO:0000313|EMBL:CDC72988.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L2_047_000M1_scaffold_142_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9155..9856
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZCE1_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75887.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_142_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9875..10885
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPB4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94933.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_142_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12075..12977
DNA (903bp) protein (301aa)
Peptidase C39 family n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TKL4_9FIRM
Peptidase C39 family {ECO:0000313|EMBL:CDC72795.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Peptidase C39 family.
L2_047_000M1_scaffold_142_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13104..13766
DNA (663bp) protein (221aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=Eubacterium RepID=D4JPB6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK94935.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_142_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13763..15193
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Signal transduction histidine kinase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPB7_9FIRM
Signal transduction histidine kinase
L2_047_000M1_scaffold_142_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15183..16193
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPB8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94937.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_142_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16428..18329
DNA (1902bp) protein (634aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBK94938.1}; EC=3.2.1.23 {ECO:0000313|EMBL:CBK94938.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Beta-galactosidase/beta-glucuronidase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPB9_9FIRM
L2_047_000M1_scaffold_142_16
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18313..19260
DNA (948bp) protein (316aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Beta-galactosidase small subunit (Lactase small subunit) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U496_9FIRM
beta-galactosidase, small subunit (lactase, small subunit)
L2_047_000M1_scaffold_142_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19325..20182)
DNA (858bp) protein (286aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPC1_9FIRM
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CBK94940.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_142_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20442..21806
DNA (1365bp) protein (455aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TYK3_9FIRM
hypothetical protein
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CDC74934.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_047_000M1_scaffold_142_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21837..22625
DNA (789bp) protein (263aa)
Two-component response regulator n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZBN8_EUBR3
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:ACR75770.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_142_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22730..23494)
DNA (765bp) protein (255aa)
Peroxiredoxin n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPC3_9FIRM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:CBK94942.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_142_21
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23537..24424)
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7AZM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55162.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
putative iron-sulfur-binding membrane protein
L2_047_000M1_scaffold_142_22
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24654..25334
DNA (681bp) protein (227aa)
Response regulator n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TRV9_9FIRM
Response regulator {ECO:0000313|EMBL:CDC74915.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
response regulator
L2_047_000M1_scaffold_142_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25331..26368
DNA (1038bp) protein (346aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Signal transduction histidine kinase n=2 Tax=Eubacterium rectale RepID=D4JPC5_9FIRM
Signal transduction histidine kinase
L2_047_000M1_scaffold_142_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26654..27544
DNA (891bp) protein (297aa)
Uncharacterized conserved protein n=3 Tax=Eubacterium rectale RepID=D4JPC6_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK90738.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_047_000M1_scaffold_142_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27639..27992
DNA (354bp) protein (118aa)
Hpt domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E5P7_9FIRM
Hpt domain.
Hpt domain {ECO:0000313|EMBL:CBK90737.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_047_000M1_scaffold_142_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28030..28185
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E5P6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90736.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_047_000M1_scaffold_142_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28200..29255)
DNA (1056bp) protein (352aa)
AraC-type DNA-binding domain-containing proteins n=2 Tax=Eubacterium RepID=D4JPC8_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBK94947.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_142_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29377..30819
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZBN0_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75762.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_142_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30842..33310
DNA (2469bp) protein (823aa)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPD0_9FIRM
Beta-galactosidase/beta-glucuronidase
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CBK94949.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_142_30
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33497..34054
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TYB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72901.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
Displaying items 1-30 of 127 in total

View Taxonomy