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L2_047_000M1_scaffold_173

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_173_1
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..343
DNA (342bp) protein (114aa)
Ig domain-containing protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5WFI9_9CLOT
Ig domain-containing protein {ECO:0000313|EMBL:CCZ91322.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
hypothetical protein
L2_047_000M1_scaffold_173_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1010..3295)
DNA (2286bp) protein (762aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
xyn10E; endo-1,4-beta-xylanase (EC:3.2.1.8)
Endoxylanase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9D0_9CLOT
L2_047_000M1_scaffold_173_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3435..4751)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8D7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74336.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_173_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4765..5217)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8S6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74335.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
MutT/NUDIX family protein
L2_047_000M1_scaffold_173_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5242..5880)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C852_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74334.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_173_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6001..6765)
DNA (765bp) protein (255aa)
NERD domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAJ7_9CLOT
NERD domain protein {ECO:0000313|EMBL:CDD74333.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
NERD domain-containing protein
L2_047_000M1_scaffold_173_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6790..7140)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9C6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74332.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_173_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7383..8684)
DNA (1302bp) protein (434aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8D3_9CLOT
L2_047_000M1_scaffold_173_9
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8902..9051)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z258_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR71248.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_047_000M1_scaffold_173_10
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9058..10047)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5EBG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX86097.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Virulence protein
L2_047_000M1_scaffold_173_11
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10098..10304)
DNA (207bp) protein (69aa)
Helix-turn-helix n=1 Tax=Clostridium sp. CAG:590 RepID=R5E0W9_9CLOT
Helix-turn-helix {ECO:0000313|EMBL:CCX86098.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Helix-turn-helix.
L2_047_000M1_scaffold_173_12
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10447..13416)
DNA (2970bp) protein (990aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AGK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81613.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L2_047_000M1_scaffold_173_13
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13456..13770)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M8G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67133.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L2_047_000M1_scaffold_173_14
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13872..14204)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AQ59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ28250.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Virulence protein
L2_047_000M1_scaffold_173_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14313..14600)
DNA (288bp) protein (96aa)
Putative transcriptional regulator with C-terminal CBS domains n=1 Tax=Roseburia sp. CAG:380 RepID=R6V6U0_9FIRM
Putative transcriptional regulator with C-terminal CBS domains {ECO:0000313|EMBL:CDC93963.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L2_047_000M1_scaffold_173_16
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14587..14952)
DNA (366bp) protein (122aa)
Gp49-like PF05973 family protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6R9R2_9FIRM
Gp49-like PF05973 family protein {ECO:0000313|EMBL:CDC39706.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
hypothetical protein
L2_047_000M1_scaffold_173_17
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(15193..16233)
DNA (1041bp) protein (347aa)
Putative restriction enzyme modulator protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VM56_9CLOT
5-methylcytosine-specific restriction enzyme subunit McrC {ECO:0000313|EMBL:CRH77985.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L2_047_000M1_scaffold_173_18
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16230..18719)
DNA (2490bp) protein (830aa)
GTPase subunit of restriction endonuclease n=1 Tax=Clostridium sp. CAG:167 RepID=R5VVG3_9CLOT
GTPase subunit of restriction endonuclease {ECO:0000313|EMBL:CCZ91834.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
GTPase subunit of restriction endonuclease
L2_047_000M1_scaffold_173_19
unknown

Not on your lists

comp(18790..19806)
DNA (1017bp) protein (339aa)

This feature has no annotations

L2_047_000M1_scaffold_173_20
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(19994..24763)
DNA (4770bp) protein (1590aa)
DEAD/DEAH box helicase n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GTH8_FILAD
Uncharacterized protein {ECO:0000313|EMBL:ETZ30504.1}; TaxID=1357398 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum 13_3C.;"
DEAD/DEAH box helicase
L2_047_000M1_scaffold_173_21
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(24760..27975)
DNA (3216bp) protein (1072aa)
Uncharacterized protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GTH7_FILAD
Uncharacterized protein {ECO:0000313|EMBL:ETZ30505.1}; TaxID=1357398 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum 13_3C.;"
hypothetical protein
L2_047_000M1_scaffold_173_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28479..29525)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LR34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38755.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Virulence protein
L2_047_000M1_scaffold_173_23
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30131..30358)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bacillus cereus HuA2-1 RepID=J8YUZ0_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJV86823.1}; TaxID=1053201 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuA2-1.;"
hypothetical protein
L2_047_000M1_scaffold_173_24
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30381..32930)
DNA (2550bp) protein (850aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SR86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP27195.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
hypothetical protein
L2_047_000M1_scaffold_173_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32934..36074)
DNA (3141bp) protein (1047aa)
Type I site-specific deoxyribonuclease, HsdR family protein {ECO:0000313|EMBL:EQJ61837.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EQJ61837.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Type I site-specific deoxyribonuclease, HsdR family protein n=1 Tax=Clostridium difficile P28 RepID=T4P2L8_CLODI
type I restriction enzyme, R subunit
L2_047_000M1_scaffold_173_26
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36093..37337)
DNA (1245bp) protein (415aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SR88_9FIRM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDP27197.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
restriction endonuclease S subunit
L2_047_000M1_scaffold_173_27
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37331..40000)
DNA (2670bp) protein (890aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EDP27198.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EDP27198.1};; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Type I restriction-modification system, M subunit n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SR89_9FIRM
type I restriction enzyme M protein
L2_047_000M1_scaffold_173_28
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40683..41207
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XGI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19555.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L2_047_000M1_scaffold_173_29
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41378..42253)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57601.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
RHS repeat-associated core domain protein
L2_047_000M1_scaffold_173_30
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42258..42683)
DNA (426bp) protein (142aa)
SMI1 / KNR4 family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFJ3_9CLOT
SMI1 / KNR4 family protein {ECO:0000313|EMBL:EDO57600.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
Displaying items 1-30 of 80 in total

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