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L2_047_000M1_scaffold_185

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_185_1
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1224)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LIH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85635.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L2_047_000M1_scaffold_185_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1415..2455)
DNA (1041bp) protein (347aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EEG30259.1}; EC=3.2.2.- {ECO:0000313|EMBL:EEG30259.1};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDR1_9CLOT
L2_047_000M1_scaffold_185_3
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

2708..3742
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43536.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L2_047_000M1_scaffold_185_4
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3943..4653)
DNA (711bp) protein (237aa)
zinc transporter ZupT n=1 Tax=Synechococcus sp. CB0205 RepID=UPI0002001A4C
Uncharacterized protein {ECO:0000313|EMBL:EYE89164.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
zinc transporter ZupT
L2_047_000M1_scaffold_185_5
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4894..5802
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JQQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE65971.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
dTDP-glucose pyrophosphorylase
L2_047_000M1_scaffold_185_6
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

5907..7022
DNA (1116bp) protein (372aa)
Transporter YbiR family n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BGJ3_9FIRM
transporter, YbiR family
Transporter YbiR family {ECO:0000313|EMBL:CDD64642.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
L2_047_000M1_scaffold_185_7
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

7383..8732
DNA (1350bp) protein (450aa)
Citrate transporter n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BD91_9FIRM
Citrate transporter {ECO:0000313|EMBL:CDD62892.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
arsenical pump membrane protein
L2_047_000M1_scaffold_185_8
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

8751..9380
DNA (630bp) protein (210aa)
Cytidylate kinase n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BC62_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CDD62891.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
cytidylate kinase
L2_047_000M1_scaffold_185_9
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9462..10058)
DNA (597bp) protein (199aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9L6Z4_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG80426.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Mn-containing catalase
L2_047_000M1_scaffold_185_10
unknown

Not on your lists

comp(10061..10309)
DNA (249bp) protein (83aa)

This feature has no annotations

L2_047_000M1_scaffold_185_11
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10302..10541)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EGE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG29472.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L2_047_000M1_scaffold_185_12
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10823..11968
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LKX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56392.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Superfamily II DNA and RNA helicases
L2_047_000M1_scaffold_185_13
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11981..12175
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IQT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53663.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L2_047_000M1_scaffold_185_14
unknown

Not on your lists

comp(12236..12442)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_047_000M1_scaffold_185_15
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12604..14661
DNA (2058bp) protein (686aa)
Sulfatase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I314_CLOCE
sulfatase
Sulfatase {ECO:0000313|EMBL:ACL76157.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L2_047_000M1_scaffold_185_16
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14685..15206
DNA (522bp) protein (174aa)
Folate transporter FolT n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QYR9_9CLOT
Folate transporter FolT {ECO:0000313|EMBL:EPR09228.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
hypothetical protein
L2_047_000M1_scaffold_185_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15280..16140)
DNA (861bp) protein (287aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ11_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEG92131.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
amino acid ABC transporter substrate-binding protein
L2_047_000M1_scaffold_185_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16170..16931)
DNA (762bp) protein (254aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.-)
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBK95832.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK95832.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRW3_9FIRM
L2_047_000M1_scaffold_185_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16938..17612)
DNA (675bp) protein (225aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZMK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30242.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
amino acid ABC transporter permease
L2_047_000M1_scaffold_185_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17605..18261)
DNA (657bp) protein (219aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ14_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG92134.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
amino acid ABC transporter permease
L2_047_000M1_scaffold_185_21
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18592..19002)
DNA (411bp) protein (137aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5S0_9CLOT
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L2_047_000M1_scaffold_185_22
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19114..19974)
DNA (861bp) protein (287aa)
UPF0042 nucleotide-binding protein CLOLEP_00068 n=2 Tax=Clostridium RepID=A7VNE4_9CLOT
Nucleotide-binding protein BN578_00732 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
UPF0042 nucleotide-binding protein
L2_047_000M1_scaffold_185_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20136..21365
DNA (1230bp) protein (410aa)
Protein WblI n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZI5_CLOSA
wblI; protein WblI
Protein WblI {ECO:0000313|EMBL:AGX45086.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_047_000M1_scaffold_185_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21362..22981
DNA (1620bp) protein (540aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 PF15_9FIRM">RepID=B0PF15_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EDS09948.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_047_000M1_scaffold_185_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23287..23847)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45570.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted membrane protein
L2_047_000M1_scaffold_185_26
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24104..24766
DNA (663bp) protein (221aa)
Putative phosphoglycolate phosphatase, bacterial n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LB41_9FIRM
Putative phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:EFY05957.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
phosphoglycolate phosphatase
L2_047_000M1_scaffold_185_27
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25208..26137)
DNA (930bp) protein (310aa)
Phosphofructokinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZFL4_AZOL4
fruK; fructose-1-phosphate kinase
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
L2_047_000M1_scaffold_185_28
unknown

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comp(26350..26835)
DNA (486bp) protein (162aa)

This feature has no annotations

L2_047_000M1_scaffold_185_29
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26826..27551)
DNA (726bp) protein (242aa)
Transcriptional regulator, MerR family n=1 Tax=Coprococcus catus GD/7 RepID=D4JAA8_9FIRM
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CBK81279.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_047_000M1_scaffold_185_30
unknown

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comp(27683..27835)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying items 1-30 of 123 in total

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