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L2_047_000M1_scaffold_189

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_189_1
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(413..2383)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11347.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type multidrug transport system, ATPase and permease components
L2_047_000M1_scaffold_189_2
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2383..4125)
DNA (1743bp) protein (581aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGZ8_9FIRM
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:CDF11348.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type multidrug transport system, ATPase and permease components
L2_047_000M1_scaffold_189_3
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4399..5310
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11349.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
LysR family transcriptional regulator
L2_047_000M1_scaffold_189_4
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5448..5924)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6KES6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB68506.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
L2_047_000M1_scaffold_189_5
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6031..10485)
DNA (4455bp) protein (1485aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
DNA polymerase III polC-type n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFK5_9FIRM
DNA polymerase III subunit alpha
L2_047_000M1_scaffold_189_6
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10522..11577)
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH02_9FIRM
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L2_047_000M1_scaffold_189_7
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11597..13081)
DNA (1485bp) protein (495aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NF34_9FIRM
hypothetical protein
L2_047_000M1_scaffold_189_8
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13072..14238)
DNA (1167bp) protein (389aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGW3_9FIRM
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_047_000M1_scaffold_189_9
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14275..15087)
DNA (813bp) protein (271aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Phosphatidate cytidylyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND27_9FIRM
phosphatidate cytidylyltransferase
L2_047_000M1_scaffold_189_10
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15091..15825)
DNA (735bp) protein (245aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Isoprenyl transferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFL4_9FIRM
UDP pyrophosphate synthetase
L2_047_000M1_scaffold_189_11
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16027..16578)
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFL9_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
frr; ribosome recycling factor
L2_047_000M1_scaffold_189_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16641..17348)
DNA (708bp) protein (236aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Uridylate kinase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGX3_9FIRM
uridylate kinase
L2_047_000M1_scaffold_189_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17449..18387)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11368.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_189_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18561..20306)
DNA (1746bp) protein (582aa)
Putative sensory transducer protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND36_9FIRM
Putative sensory transducer protein {ECO:0000313|EMBL:CDF11369.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Methyl-accepting chemotaxis protein
L2_047_000M1_scaffold_189_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20732..21817)
DNA (1086bp) protein (362aa)
Elongation factor Ts n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NF44_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
elongation factor EF-Ts
L2_047_000M1_scaffold_189_16
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21921..22649)
DNA (729bp) protein (243aa)
30S ribosomal protein S2 n=1 Tax=Eubacterium sp. CAG:252 RepID=R6KBL8_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
rpsB; 30S ribosomal protein S2
L2_047_000M1_scaffold_189_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22865..23425)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11372.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_189_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23524..24162)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11373.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_189_19
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24159..24473)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11374.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_189_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24510..26117)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11376.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_189_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26171..26929)
DNA (759bp) protein (253aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH22_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
phosphatidylserine decarboxylase
L2_047_000M1_scaffold_189_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26965..27279)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NF52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11380.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_189_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27284..27775)
DNA (492bp) protein (164aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFM9_9FIRM
chemotaxis protein CheD
L2_047_000M1_scaffold_189_24
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27803..28432)
DNA (630bp) protein (210aa)
Chemotaxis protein CheC n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NGY9_9FIRM
Chemotaxis protein CheC {ECO:0000313|EMBL:CDF11382.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
chemotaxis protein CheC
L2_047_000M1_scaffold_189_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28462..28935)
DNA (474bp) protein (158aa)
Purine-binding chemotaxis protein CheW n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH25_9FIRM
Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:CDF11383.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
purine-binding chemotaxis protein CheW
L2_047_000M1_scaffold_189_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28951..31038)
DNA (2088bp) protein (696aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Two-component system chemotaxis family sensor kinase CheA n=1 Tax=Eubacterium sp. CAG:76 RepID=R7ND49_9FIRM
chemotaxis protein CheA
L2_047_000M1_scaffold_189_27
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31040..32230)
DNA (1191bp) protein (397aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NF54_9FIRM
hypothetical protein
L2_047_000M1_scaffold_189_28
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32223..32963)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF11386.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_189_29
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33007..33888)
DNA (882bp) protein (294aa)
Site-determining protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NH29_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
flagellar biosynthesis protein FlhG
L2_047_000M1_scaffold_189_30
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33888..35219)
DNA (1332bp) protein (444aa)
Flagellar biosynthesis protein FlhF n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NFN6_9FIRM
Flagellar biosynthesis protein FlhF {ECO:0000313|EMBL:CDF11391.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
flagellar biosynthesis protein FlhF
Displaying items 1-30 of 85 in total

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