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L2_047_000M1_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_192_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(471..845)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B764BF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF58315.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000M1_scaffold_192_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(838..2943)
DNA (2106bp) protein (702aa)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MK82_9CLOT
nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits {ECO:0000313|EMBL:AGF58319.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_047_000M1_scaffold_192_3
Helicobacter sp. MIT 05-5293, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2934..3830)
DNA (897bp) protein (299aa)
Uncharacterized protein {ECO:0000313|EMBL:KGL06716.1}; TaxID=1548149 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter sp. MIT 05-5293.;"
L2_047_000M1_scaffold_192_4
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3855..5303)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JWJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE68314.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
EpsN protein
L2_047_000M1_scaffold_192_5
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5406..6071)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99364.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein
L2_047_000M1_scaffold_192_6
Geobacillus sp. WSUCF1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6055..7146)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. WSUCF1 RepID=S7TXF3_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EPR26449.1}; TaxID=886559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. WSUCF1.;"
hypothetical protein
L2_047_000M1_scaffold_192_7
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7183..8184)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B163_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89635.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
Glycosyltransferases involved in cell wall biogenesis
L2_047_000M1_scaffold_192_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8174..9289)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IB54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61369.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_047_000M1_scaffold_192_9
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(9299..10291)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JI45_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF25448.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
hypothetical protein
L2_047_000M1_scaffold_192_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10359..11462)
DNA (1104bp) protein (368aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDP20401.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDP20401.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SGY1_9FIRM
Glycosyltransferase
L2_047_000M1_scaffold_192_11
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11489..12928)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09510.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L2_047_000M1_scaffold_192_12
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12987..13916)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09509.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
polysaccharide biosynthesis protein
L2_047_000M1_scaffold_192_13
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13948..14691)
DNA (744bp) protein (248aa)
Capsular exopolysaccharide family n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBN3_9FIRM
Capsular exopolysaccharide family {ECO:0000313|EMBL:CDF09508.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
non-specific protein-tyrosine kinase
L2_047_000M1_scaffold_192_14
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15314..16102
DNA (789bp) protein (263aa)
ABC-type nitrate/sulfonate/taurine/bicarbonate transport system protein ATPase components n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBK9_9FIRM
ABC-type nitrate/sulfonate/taurine/bicarbonate transport system protein ATPase components {ECO:0000313|EMBL:CDF09507.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_047_000M1_scaffold_192_15
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16099..16917
DNA (819bp) protein (273aa)
Sulfonate/nitrate/taurine transport system permease protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NA97_9FIRM
Sulfonate/nitrate/taurine transport system permease protein {ECO:0000313|EMBL:CDF09506.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
sulfonate/nitrate/taurine transport system permease
L2_047_000M1_scaffold_192_16
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17061..17564
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09505.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_192_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17770..19764
DNA (1995bp) protein (665aa)
Molecular chaperone HtpG n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7T5_9FIRM
Molecular chaperone HtpG {ECO:0000313|EMBL:CDF09504.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
heat shock protein 90
L2_047_000M1_scaffold_192_18
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19840..20553
DNA (714bp) protein (238aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Signal peptidase I n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBM8_9FIRM
signal peptidase I
L2_047_000M1_scaffold_192_19
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21090..21647
DNA (558bp) protein (186aa)
Elongation factor P n=3 Tax=environmental samples RepID=R6JW74_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
elongation factor EF-P
L2_047_000M1_scaffold_192_20
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21825..22268)
DNA (444bp) protein (148aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
3-dehydroquinate dehydratase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9R3_9FIRM
3-dehydroquinate dehydratase
L2_047_000M1_scaffold_192_21
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22271..22780)
DNA (510bp) protein (170aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Shikimate kinase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7T1_9FIRM
shikimate kinase
L2_047_000M1_scaffold_192_22
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22773..23645)
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Shikimate dehydrogenase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBM2_9FIRM
shikimate 5-dehydrogenase
L2_047_000M1_scaffold_192_23
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23755..24276)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09497.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_192_24
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24344..24793)
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NA87_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
nrdR; NrdR family transcriptional regulator
L2_047_000M1_scaffold_192_25
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25121..25897)
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9Q8_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
RNA polymerase sporulation-specific sigma factor
L2_047_000M1_scaffold_192_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26037..26720)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09494.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Predicted Zn-dependent protease
L2_047_000M1_scaffold_192_27
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26901..27155
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09493.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
hypothetical protein
L2_047_000M1_scaffold_192_28
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27234..28283
DNA (1050bp) protein (350aa)
6-phosphogluconolactonase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBJ4_9FIRM
6-phosphogluconolactonase {ECO:0000313|EMBL:CDF09492.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
6-phosphogluconolactonase
L2_047_000M1_scaffold_192_29
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28391..29476)
DNA (1086bp) protein (362aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NA81_9FIRM
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CDF09491.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
tryptophanyl-tRNA synthetase II
L2_047_000M1_scaffold_192_30
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29639..30559
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Aspartate carbamoyltransferase n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N9Q3_9FIRM
pyrB; aspartate carbamoyltransferase catalytic subunit
Displaying items 1-30 of 125 in total

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