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L2_047_000M1_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_218_1
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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393..1517
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K769_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60944.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
L2_047_000M1_scaffold_218_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2019..2381
DNA (363bp) protein (121aa)
Transposase, IS116/IS110/IS902 family n=11 Tax=root RepID=A5KMK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82699.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
transposase IS116/IS110/IS902 family protein
L2_047_000M1_scaffold_218_3
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3066..3206
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WR82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD09434.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L2_047_000M1_scaffold_218_4
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3272..4294
DNA (1023bp) protein (341aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
DNA adenine methylase n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Z948_9FIRM
DNA methyltransferase
L2_047_000M1_scaffold_218_5
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

4296..5204
DNA (909bp) protein (303aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DZL9_9FIRM
hypothetical protein
L2_047_000M1_scaffold_218_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5214..7331
DNA (2118bp) protein (706aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT40_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH00046.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_047_000M1_scaffold_218_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7466..7675
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YAK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA23920.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Excisionase from transposon Tn916.
L2_047_000M1_scaffold_218_8
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7675..7836
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BYI3_9FIRM
Site-specific recombinase XerD
Uncharacterized protein {ECO:0000313|EMBL:ETD19521.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L2_047_000M1_scaffold_218_9
unknown

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comp(7776..7991)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_047_000M1_scaffold_218_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7981..8376)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZXW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35327.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L2_047_000M1_scaffold_218_11
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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8514..10124
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QJH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC36798.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
ABC transporter ATP-binding protein
L2_047_000M1_scaffold_218_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10254..10721
DNA (468bp) protein (156aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8A5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74296.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_218_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10787..11410
DNA (624bp) protein (208aa)
NADPH-dependent FMN reductase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8P7_9CLOT
NADPH-dependent FMN reductase {ECO:0000313|EMBL:CDD74295.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
NADPH-dependent FMN reductase
L2_047_000M1_scaffold_218_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11454..11990
DNA (537bp) protein (179aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C821_9CLOT
L2_047_000M1_scaffold_218_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12105..13481)
DNA (1377bp) protein (459aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAH1_9CLOT
L2_047_000M1_scaffold_218_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13693..14535
DNA (843bp) protein (281aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C998_9CLOT
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDD74292.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
CAAX amino protease family protein
L2_047_000M1_scaffold_218_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14532..15749
DNA (1218bp) protein (406aa)
Aspartate aminotransferase (EC:2.6.1.1)
Aminotransferase class I and II n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8A2_9CLOT
Aminotransferase class I and II {ECO:0000313|EMBL:CDD74291.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_218_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15825..16700
DNA (876bp) protein (292aa)
Transglycosylase SLT domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8P4_9CLOT
Transglycosylase SLT domain protein {ECO:0000313|EMBL:CDD74290.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
soluble lytic murein transglycosylase
L2_047_000M1_scaffold_218_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16722..17240)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C816_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74289.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_218_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17254..18183)
DNA (930bp) protein (310aa)
Radical SAM protein TIGR01212 family n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAG8_9CLOT
Radical SAM protein TIGR01212 family {ECO:0000313|EMBL:CDD74288.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
radical SAM protein, TIGR01212 family
L2_047_000M1_scaffold_218_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18186..19340)
DNA (1155bp) protein (385aa)
Malic enzyme (EC:1.1.1.38)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C996_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74287.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_218_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19473..20726
DNA (1254bp) protein (418aa)
UDP-glucose pyrophosphorylase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C897_9CLOT
UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:CDD74286.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
UDP-N-acetylglucosamine pyrophosphorylase
L2_047_000M1_scaffold_218_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20924..22873
DNA (1950bp) protein (650aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8N9_9CLOT
rho; transcription termination factor Rho
L2_047_000M1_scaffold_218_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22988..23188
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C812_9CLOT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
RpmE; 50S ribosomal protein L31
L2_047_000M1_scaffold_218_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23260..24333
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74283.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_218_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24330..25169
DNA (840bp) protein (280aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Release factor glutamine methyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C991_9CLOT
protein-(glutamine-N5) methyltransferase
L2_047_000M1_scaffold_218_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25180..26253
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C892_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
bacterial peptide chain release factor 1 (bRF-1)
L2_047_000M1_scaffold_218_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26273..27406
DNA (1134bp) protein (378aa)
Sensory box/GGDEF domain/EAL domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8N5_9CLOT
Sensory box/GGDEF domain/EAL domain protein {ECO:0000313|EMBL:CDD74280.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_218_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27406..28776
DNA (1371bp) protein (457aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
H(+)-transporting two-sector ATPase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C807_9CLOT
H(+)-transporting two-sector ATPase {ECO:0000313|EMBL:CDD74279.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_218_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28787..29446
DNA (660bp) protein (220aa)
TrkA-N domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAG1_9CLOT
TrkA-N domain protein {ECO:0000313|EMBL:CDD74278.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
TrkA domain-containing protein
Displaying items 1-30 of 80 in total

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