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L2_047_000M1_scaffold_225

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_225_1
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(220..573)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FJT3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY05098.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L2_047_000M1_scaffold_225_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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647..1534
DNA (888bp) protein (296aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Putative ATP-dependent DNA helicase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WRX2_BACF6
putative ATP-dependent DNA helicase
L2_047_000M1_scaffold_225_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1685..2167)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WRX1_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW21890.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L2_047_000M1_scaffold_225_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2179..2400)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WRX0_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW21889.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L2_047_000M1_scaffold_225_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2478..3011)
DNA (534bp) protein (178aa)
Putative anti-restriction protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WRW9_BACF6
putative anti-restriction protein
Putative anti-restriction protein {ECO:0000313|EMBL:CBW21888.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L2_047_000M1_scaffold_225_6
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3569..4099)
DNA (531bp) protein (177aa)
ORF6N domain n=5 Tax=Bacteroides RepID=D6D3L0_9BACE
ORF6N domain.
Uncharacterized protein {ECO:0000313|EMBL:EIY25809.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
L2_047_000M1_scaffold_225_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4184..4711)
DNA (528bp) protein (176aa)
Integrase n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K2B0_9BACE
tyrosine type site-specific recombinase
Tyrosine type site-specific recombinase {ECO:0000313|EMBL:BAD48089.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_047_000M1_scaffold_225_8
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4719..5384)
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I8VHG4_9BACE
putative transposase
Integrase {ECO:0000313|EMBL:EFI40859.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L2_047_000M1_scaffold_225_9
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6047..7531
DNA (1485bp) protein (495aa)
Outer membrane protein transport protein, Ompp1/FadL/TodX family n=3 Tax=root RepID=B0MVV2_9BACT
Outer membrane protein transport protein, Ompp1/FadL/TodX family {ECO:0000313|EMBL:EDS03482.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Long-chain fatty acid transport protein
L2_047_000M1_scaffold_225_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8101..12360)
DNA (4260bp) protein (1420aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JS22_9BACT
L2_047_000M1_scaffold_225_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12409..16272)
DNA (3864bp) protein (1288aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
DNA-directed RNA polymerase subunit beta n=3 Tax=Alistipes RepID=B0MVV5_9BACT
DNA-directed RNA polymerase subunit beta
L2_047_000M1_scaffold_225_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16513..16890)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=2 Tax=Alistipes RepID=B0MVV6_9BACT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L12
L2_047_000M1_scaffold_225_13
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(16930..17451)
DNA (522bp) protein (174aa)
Ribosomal protein L10 n=2 Tax=Alistipes RepID=B0MVV7_9BACT
Ribosomal protein L10 {ECO:0000313|EMBL:CDE65629.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
LSU ribosomal protein L10P
L2_047_000M1_scaffold_225_14
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(17469..18167)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=2 Tax=Alistipes RepID=B0MVV8_9BACT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
50S ribosomal protein L1
L2_047_000M1_scaffold_225_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(18182..18622)
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=2 Tax=Alistipes RepID=B0MVV9_9BACT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L11
L2_047_000M1_scaffold_225_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18639..19199)
DNA (561bp) protein (187aa)
Transcription termination/antitermination protein NusG n=2 Tax=Alistipes RepID=B0MVW0_9BACT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
transcription antitermination protein nusG
L2_047_000M1_scaffold_225_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19214..19411)
DNA (198bp) protein (66aa)
Preprotein translocase, SecE subunit n=3 Tax=root RepID=B0MVW1_9BACT
Preprotein translocase, SecE subunit {ECO:0000313|EMBL:EDS03491.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Preprotein translocase subunit SecE
L2_047_000M1_scaffold_225_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19551..20738)
DNA (1188bp) protein (396aa)
Elongation factor Tu n=3 Tax=root RepID=B0MVW2_9BACT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
translation elongation factor TU
L2_047_000M1_scaffold_225_19
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21664..22371
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JPQ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65621.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
PP-loop superfamily ATP-utilizing enzyme
L2_047_000M1_scaffold_225_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22501..23220
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JNT3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65620.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L2_047_000M1_scaffold_225_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23279..24463)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JNU1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65619.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L2_047_000M1_scaffold_225_22
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24460..25104)
DNA (645bp) protein (215aa)
ABC transporter ATP-binding protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JPU3_9BACT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE65618.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
putative ATP-binding component of ABC transporter
L2_047_000M1_scaffold_225_23
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25371..26924)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=2 Tax=root RepID=B0MW31_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03506.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_047_000M1_scaffold_225_24
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27166..27837)
DNA (672bp) protein (224aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=root RepID=B0MVX2_9BACT
FKBP-type peptidyl-prolyl cis-trans isomerase
L2_047_000M1_scaffold_225_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27834..29204)
DNA (1371bp) protein (457aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=root RepID=B0MVX3_9BACT
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
sodium/proton antiporter, NhaA family
L2_047_000M1_scaffold_225_26
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29291..30340)
DNA (1050bp) protein (350aa)
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family (EC:3.5.3.11)
Arginase family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVX4_9BACT
Arginase family protein {ECO:0000313|EMBL:EDS03445.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L2_047_000M1_scaffold_225_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30571..31566
DNA (996bp) protein (332aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDS03447.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDS03447.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
4-phosphoerythronate dehydrogenase (EC:1.1.1.290)
4-phosphoerythronate dehydrogenase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVX6_9BACT
L2_047_000M1_scaffold_225_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31622..32692
DNA (1071bp) protein (357aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
dihydroorotate oxidase A (EC:1.3.98.1)
Dihydroorotate oxidase n=2 Tax=Alistipes RepID=B0MVX7_9BACT
L2_047_000M1_scaffold_225_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32708..33961
DNA (1254bp) protein (418aa)
CinA-like protein n=2 Tax=root RepID=R7JPS8_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
competence/damage-inducible protein CinA-like protein
L2_047_000M1_scaffold_225_30
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34677..36782
DNA (2106bp) protein (702aa)
Uncharacterized protein n=5 Tax=root RepID=B0MVX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03450.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Displaying items 1-30 of 80 in total

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