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L2_047_000M1_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_229_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..797)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75135.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_229_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1450..2010
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75134.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_229_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2186..3346
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CCT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75133.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_229_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3424..4587)
DNA (1164bp) protein (388aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBN2_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDD75132.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Uncharacterized flavoproteins
L2_047_000M1_scaffold_229_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4654..5724)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75130.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
lipoprotein
L2_047_000M1_scaffold_229_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6208..7134)
DNA (927bp) protein (309aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Cysteine synthase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9X1_9CLOT
hypothetical protein
L2_047_000M1_scaffold_229_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7270..7704)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74124.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
transcriptional regulator, BadM/Rrf2 family
L2_047_000M1_scaffold_229_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8005..8265)
DNA (261bp) protein (87aa)
Plasmid stabilization system n=1 Tax=Clostridium sp. CAG:62 RepID=R7C829_9CLOT
Plasmid stabilization system {ECO:0000313|EMBL:CDD74125.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_229_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8283..8489)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74126.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_229_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8643..9599)
DNA (957bp) protein (319aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Biotin synthase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8R0_9CLOT
biotin synthase
L2_047_000M1_scaffold_229_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9684..10862)
DNA (1179bp) protein (393aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICARFT/IMPCHase bienzyme n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9X5_9CLOT
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:CDD74128.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_229_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10874..11587)
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7H4_9CLOT
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:CDD74129.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
IMP cyclohydrolase-like protein.
L2_047_000M1_scaffold_229_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11807..13348)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C833_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74130.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_229_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13379..15046)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74131.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_229_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15081..16373)
DNA (1293bp) protein (431aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8R4_9CLOT
L2_047_000M1_scaffold_229_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16440..17210)
DNA (771bp) protein (257aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9X9_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CDD74133.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
polysaccharide deacetylase
L2_047_000M1_scaffold_229_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17285..18523)
DNA (1239bp) protein (413aa)
GTPase HflX n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7I1_9CLOT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
GTP-binding protein HflX
L2_047_000M1_scaffold_229_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18535..19512)
DNA (978bp) protein (326aa)
Biotin-protein ligase n=2 Tax=root RepID=R7C838_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
birA; bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase
L2_047_000M1_scaffold_229_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19509..20747)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74136.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
peptidase U32
L2_047_000M1_scaffold_229_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20751..21434)
DNA (684bp) protein (228aa)
O-methyltransferase family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8S0_9CLOT
O-methyltransferase family protein {ECO:0000313|EMBL:CDD74137.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
O-methyltransferase
L2_047_000M1_scaffold_229_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21509..21868)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74138.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_229_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21872..23542)
DNA (1671bp) protein (557aa)
Beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7I6_9CLOT
Beta-lactamase domain protein {ECO:0000313|EMBL:CDD74139.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
beta-lactamase domain-containing protein
L2_047_000M1_scaffold_229_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23558..23830)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C845_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74140.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Protein of unknown function (DUF1292).
L2_047_000M1_scaffold_229_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23840..24262)
DNA (423bp) protein (141aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7S4_9CLOT
conserved hypothetical protein TIGR00250
L2_047_000M1_scaffold_229_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24272..24538)
DNA (267bp) protein (89aa)
UPF0297 protein BN737_00425 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8S5_9CLOT
UPF0297 protein BN737_00425 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_229_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24775..26997
DNA (2223bp) protein (741aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35424.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L2_047_000M1_scaffold_229_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27028..28791)
DNA (1764bp) protein (588aa)
Guanylate cyclase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C973_9CLOT
Guanylate cyclase {ECO:0000313|EMBL:CDD74709.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
guanylate cyclase
L2_047_000M1_scaffold_229_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29066..29827
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74708.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_229_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29840..31744
DNA (1905bp) protein (635aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAG0_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDD74707.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
diguanylate cyclase
L2_047_000M1_scaffold_229_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31735..34473)
DNA (2739bp) protein (913aa)
Response regulator receiver domain-containing protein n=2 Tax=root RepID=R7C9C2_9CLOT
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:CDD74706.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
signaling protein
Displaying items 1-30 of 81 in total

View Taxonomy