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L2_047_000M1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_239_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(76..1245)
DNA (1170bp) protein (390aa)
Site-specific recombinase, phage integrase family n=3 Tax=Bacteroidales RepID=A7ACH2_9PORP
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDN87512.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transposase
L2_047_000M1_scaffold_239_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1365..5408)
DNA (4044bp) protein (1348aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZFK1_BACUN
His Kinase A domain protein {ECO:0000313|EMBL:KDS49680.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
histidine kinase
L2_047_000M1_scaffold_239_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5581..9420)
DNA (3840bp) protein (1280aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Bacteroides uniformis RepID=I8ZNJ9_BACUN
L2_047_000M1_scaffold_239_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9473..11725)
DNA (2253bp) protein (751aa)
Glycosyl hydrolase family 20 n=2 Tax=Bacteroides RepID=R7EBY3_9BACE
F5/8 type C domain protein {ECO:0000313|EMBL:KDS49677.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
beta-N-acetylhexosaminidase
L2_047_000M1_scaffold_239_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11866..12519
DNA (654bp) protein (218aa)
Translocator protein, LysE family n=3 Tax=Bacteroides RepID=D2ESE2_9BACE
LysE type translocator family protein {ECO:0000313|EMBL:KDS49676.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
Lysine exporter protein (LYSE/YGGA)
L2_047_000M1_scaffold_239_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12589..13134
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2ESE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS49675.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L2_047_000M1_scaffold_239_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13209..14063
DNA (855bp) protein (285aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KDS49674.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KDS49674.1};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Bacteroides sp. D20 RepID=D2ESE4_9BACE
L2_047_000M1_scaffold_239_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14085..15659
DNA (1575bp) protein (525aa)
Peptide chain release factor 3 n=3 Tax=Bacteroides RepID=D2ESE5_9BACE
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
bacterial peptide chain release factor 3 (bRF-3)
L2_047_000M1_scaffold_239_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15881..16861
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7EBW3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS49672.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L2_047_000M1_scaffold_239_10
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17083..17394
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PN69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF59861.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L2_047_000M1_scaffold_239_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18001..18237
DNA (237bp) protein (79aa)
Type III restriction enzyme n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EA86_9BACE
Type III restriction enzyme domain protein {ECO:0000313|EMBL:KDS49670.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L2_047_000M1_scaffold_239_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18250..20118
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0J5G6_9BACE
DNA methylase family protein {ECO:0000313|EMBL:KDS49669.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
putative modification enzyme of type III restriction-modification system
L2_047_000M1_scaffold_239_13
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20126..20659
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7EA79_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV26201.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
putative DNA-binding protein
L2_047_000M1_scaffold_239_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20656..21381
DNA (726bp) protein (242aa)
Type III restriction enzyme n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EE95_9BACE
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:KDS49667.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
putative restriction enzyme of type III restriction-modification system
L2_047_000M1_scaffold_239_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21378..23585
DNA (2208bp) protein (736aa)
Type III restriction enzyme n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EE95_9BACE
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:KDS49667.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
putative restriction enzyme of type III restriction-modification system
L2_047_000M1_scaffold_239_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23790..24005)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZE19_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY77621.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L2_047_000M1_scaffold_239_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24036..24518
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7EAS0_9BACE
DNA-binding family protein {ECO:0000313|EMBL:KDS49666.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
DNA-binding protein
L2_047_000M1_scaffold_239_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24713..24970
DNA (258bp) protein (86aa)
Sodium pump decarboxylase, gamma subunit n=4 Tax=Bacteroides RepID=A7V0V8_BACUN
Oxaloacetate decarboxylase {ECO:0000313|EMBL:EFV26198.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
sodium pump decarboxylase gamma subunit
L2_047_000M1_scaffold_239_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25010..26848
DNA (1839bp) protein (613aa)
Pyruvate carboxylase (EC:6.4.1.1)
Biotin-requiring enzyme n=5 Tax=Bacteroides RepID=A7V0V9_BACUN
Pyruvate carboxylase subunit B {ECO:0000313|EMBL:EOS07506.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L2_047_000M1_scaffold_239_20
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26848..28083
DNA (1236bp) protein (412aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3)
Sodium ion-translocating decarboxylase, beta subunit n=6 Tax=root RepID=A7V0W0_BACUN
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:EFA20877.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L2_047_000M1_scaffold_239_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28174..29448)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZE24_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY77616.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Outer membrane protein
L2_047_000M1_scaffold_239_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29483..32512)
DNA (3030bp) protein (1010aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZPX8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY77615.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
Cation/multidrug efflux pump
L2_047_000M1_scaffold_239_23
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32525..33568)
DNA (1044bp) protein (348aa)
Efflux transporter n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VAD6_9BACE
Efflux transporter {ECO:0000313|EMBL:EFV26193.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
putative conserved lipoprotein
L2_047_000M1_scaffold_239_24
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33696..36008)
DNA (2313bp) protein (771aa)
Glycosyl hydrolase family 65 central catalytic domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2ESF4_9BACE
Glycosyl hydrolase family 65 central catalytic domain protein {ECO:0000313|EMBL:EFA20881.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
glycoside hydrolase 65
L2_047_000M1_scaffold_239_25
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36227..37600)
DNA (1374bp) protein (458aa)
Major facilitator superfamily transporter n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VAD4_9BACE
Major facilitator superfamily transporter {ECO:0000313|EMBL:EFV26191.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
major facilitator superfamily MFS_1
L2_047_000M1_scaffold_239_26

Not on your lists

comp(37620..38624)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=root RepID=R7EBT5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61506.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
LacI family transcriptional regulator
L2_047_000M1_scaffold_239_27
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38840..40015
DNA (1176bp) protein (392aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
Glycosyl hydrolase family 53 n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VAD2_9BACE
L2_047_000M1_scaffold_239_28
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40044..42521
DNA (2478bp) protein (826aa)
beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2ESG3_9BACE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EFA20890.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L2_047_000M1_scaffold_239_29
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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43241..46234
DNA (2994bp) protein (998aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6ASP9_9BACE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDA49551.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
SusC/RagA family TonB-linked outer membrane protein
L2_047_000M1_scaffold_239_30
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46249..47889
DNA (1641bp) protein (547aa)
RagB/SusD family protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LIY8_9BACE
RagB/SusD family protein {ECO:0000313|EMBL:CDB82121.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
RagB/SusD family protein
Displaying items 1-30 of 71 in total

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