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L2_047_000M1_scaffold_258

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_258_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(778..1737)
DNA (960bp) protein (320aa)
Predicted permeases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5A8_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBL14803.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1866..2246
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5A7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14802.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2313..2537
DNA (225bp) protein (75aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E7I4_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCX84086.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_258_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2858..4066)
DNA (1209bp) protein (403aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=2 Tax=root RepID=R5DYW9_9FIRM
L2_047_000M1_scaffold_258_5
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4271..5407
DNA (1137bp) protein (379aa)
UPF0348 protein BN462_00046 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVC5_9FIRM
UPF0348 protein BN462_00046 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted nucleotidyltransferase
L2_047_000M1_scaffold_258_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5711..6469
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E5P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84082.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_258_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6546..9167
DNA (2622bp) protein (874aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.1.1.1 1.2.1.10)
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5A2_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9810..10559
DNA (750bp) protein (250aa)
Phosphotransferase enzyme family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DV25_9FIRM
Phosphotransferase enzyme family {ECO:0000313|EMBL:CCX84080.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Phosphotransferase enzyme family.
L2_047_000M1_scaffold_258_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11056..12648
DNA (1593bp) protein (531aa)
Putative peptidoglycan-binding domain-containing protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYW5_9FIRM
Putative peptidoglycan-binding domain-containing protein
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:CBL14795.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13014..14657
DNA (1644bp) protein (548aa)
Serine phosphatase RsbU, regulator of sigma subunit n=2 Tax=root RepID=D4L599_9FIRM
Serine phosphatase RsbU, regulator of sigma subunit
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:CBL14794.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_11
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14668..15822
DNA (1155bp) protein (385aa)
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L598_9FIRM
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control {ECO:0000313|EMBL:CBL14793.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_12
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16704..20429
DNA (3726bp) protein (1242aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBL14791.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBL14791.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L596_9FIRM
L2_047_000M1_scaffold_258_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20442..24038
DNA (3597bp) protein (1199aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CBL14790.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L595_9FIRM
L2_047_000M1_scaffold_258_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24236..24475)
DNA (240bp) protein (80aa)
Helix-turn-helix n=2 Tax=Ruminococcus RepID=D4L594_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CCX81024.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_258_15
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24653..25078)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Putative Holliday junction resolvase n=2 Tax=Ruminococcus RepID=D4L593_9FIRM
conserved hypothetical protein TIGR00250
L2_047_000M1_scaffold_258_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25315..27639
DNA (2325bp) protein (775aa)
Stage II sporulation protein E (SpoIIE) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQH5_9FIRM
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CCX81029.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Stage II sporulation protein E (SpoIIE).
L2_047_000M1_scaffold_258_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27954..28382)
DNA (429bp) protein (143aa)
Nuclear pore complex protein Nup153 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLF1_9FIRM
Nuclear pore complex protein Nup153 {ECO:0000313|EMBL:CCX81018.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_258_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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28744..29067
DNA (324bp) protein (108aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DYK0_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX81031.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
HipB2; transcriptional regulator
L2_047_000M1_scaffold_258_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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29287..30228
DNA (942bp) protein (314aa)
Fic/DOC family n=2 Tax=root RepID=R5DLG8_9FIRM
Fic/DOC family {ECO:0000313|EMBL:CCX81033.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Fic/DOC family.
L2_047_000M1_scaffold_258_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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30789..32078
DNA (1290bp) protein (430aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DLA6_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCX81035.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_258_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32078..32542
DNA (465bp) protein (155aa)
Predicted flavin-nucleotide-binding protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L589_9FIRM
Predicted flavin-nucleotide-binding protein
Predicted flavin-nucleotide-binding protein {ECO:0000313|EMBL:CBL14784.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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32587..33567
DNA (981bp) protein (327aa)
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D (EC:3.5.1.1)
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWP7_9FIRM
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D {ECO:0000313|EMBL:CCX81042.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_258_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33641..34942)
DNA (1302bp) protein (434aa)
Sodium/proton-potassium antiporter GerN CPA2 family (TC 2.A.37.2.2) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQI5_9FIRM
Sodium/proton-potassium antiporter GerN CPA2 family (TC 2.A.37.2.2) {ECO:0000313|EMBL:CCX81044.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L2_047_000M1_scaffold_258_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35136..35696)
DNA (561bp) protein (187aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWQ2_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX81047.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_258_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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36023..38314
DNA (2292bp) protein (764aa)
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685, ECO:0000313|EMBL:CBL14779.1};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L584_9FIRM
L2_047_000M1_scaffold_258_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38447..40246
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4L583_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL14778.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
hypothetical protein
L2_047_000M1_scaffold_258_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40261..41169
DNA (909bp) protein (303aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L582_9FIRM
Predicted esterase of the alpha-beta hydrolase superfamily
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:CBL14777.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41232..41879
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L581_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14776.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_258_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42001..42180
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81057.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_258_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42188..43261
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=2 Tax=Ruminococcus RepID=D4L580_9FIRM
bacterial peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Displaying items 1-30 of 60 in total

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