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L2_047_000M1_scaffold_264

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_264_1
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(506..1537)
DNA (1032bp) protein (344aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Thiamine-monophosphate kinase n=3 Tax=Parabacteroides RepID=B7BBI3_9PORP
thiamine-monophosphate kinase
L2_047_000M1_scaffold_264_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1530..2642)
DNA (1113bp) protein (371aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Tetraacyldisaccharide 4'-kinase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZD84_9PORP
tetraacyldisaccharide 4'-kinase
L2_047_000M1_scaffold_264_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2993..4423)
DNA (1431bp) protein (477aa)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=3 Tax=Parabacteroides RepID=B7BBI5_9PORP
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:EEC96221.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
tRNA nucleotidyltransferase
L2_047_000M1_scaffold_264_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4735..5565
DNA (831bp) protein (277aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BBI7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96223.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
lipoprotein
L2_047_000M1_scaffold_264_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5641..8154)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z0X1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09164.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_264_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8522..9361)
DNA (840bp) protein (280aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=3 Tax=Parabacteroides RepID=B7BBJ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09163.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transporter
L2_047_000M1_scaffold_264_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9375..9527
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y7H3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09162.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_047_000M1_scaffold_264_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9524..10348
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZCN9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09161.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_264_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10392..11465
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZD56_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09160.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_264_10
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11547..12608)
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
3-isopropylmalate dehydrogenase n=2 Tax=Parabacteroides RepID=B7BBJ3_9PORP
3-isopropylmalate dehydrogenase
L2_047_000M1_scaffold_264_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12668..13111)
DNA (444bp) protein (148aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Methylglyoxal synthase n=3 Tax=Parabacteroides RepID=B7BBJ4_9PORP
methylglyoxyl synthase
L2_047_000M1_scaffold_264_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13206..14702)
DNA (1497bp) protein (499aa)
HMGL-like protein n=3 Tax=Parabacteroides RepID=B7BBJ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09157.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
2-isopropylmalate synthase
L2_047_000M1_scaffold_264_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14930..15520)
DNA (591bp) protein (197aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
3-isopropylmalate dehydratase, small subunit n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZCN5_9PORP
3-isopropylmalate dehydratase small subunit
L2_047_000M1_scaffold_264_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15579..16970)
DNA (1392bp) protein (464aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.- {ECO:0000256|SAAS:SAAS00274346};; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00091399};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
leuC; putative 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=2 Tax=Parabacteroides RepID=R5DD76_9PORP
L2_047_000M1_scaffold_264_15
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16981..18477)
DNA (1497bp) protein (499aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
2-isopropylmalate synthase n=3 Tax=Parabacteroides RepID=K5Z0V7_9PORP
2-isopropylmalate synthase
L2_047_000M1_scaffold_264_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18868..19674)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNI7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12830.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_047_000M1_scaffold_264_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19679..20845)
DNA (1167bp) protein (389aa)
Ser/Thr phosphatase family protein n=3 Tax=Parabacteroides RepID=B7BBK1_9PORP
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEC96173.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
purple acid phosphatase
L2_047_000M1_scaffold_264_18
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20978..22021)
DNA (1044bp) protein (348aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
ilv-2; Ketol-acid reductoisomerase, mitochondrial (EC:1.1.1.86)
Ketol-acid reductoisomerase n=3 Tax=Parabacteroides RepID=B7BBK3_9PORP
L2_047_000M1_scaffold_264_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22060..22791)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZF20_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09810.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
acyl-ACP thioesterase
L2_047_000M1_scaffold_264_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22836..23399)
DNA (564bp) protein (188aa)
Acetolactate synthase, small subunit n=3 Tax=Parabacteroides RepID=B7BBK5_9PORP
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EKN09809.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
acetohydroxyacid synthase small subunit
L2_047_000M1_scaffold_264_21
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23412..25112)
DNA (1701bp) protein (567aa)
Acetolactate synthase, large subunit, biosynthetic type n=3 Tax=Parabacteroides RepID=B7BBK6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78119.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
acetolactate synthase large subunit
L2_047_000M1_scaffold_264_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25138..26973)
DNA (1836bp) protein (612aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y973_9PORP
L2_047_000M1_scaffold_264_23
unknown

Not on your lists

comp(27124..27231)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_047_000M1_scaffold_264_24
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27833..29008
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZEJ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76851.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
aminotransferase
L2_047_000M1_scaffold_264_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29104..29682
DNA (579bp) protein (193aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Parabacteroides RepID=B7BBL1_9PORP
peptidyl-prolyl cis-trans isomerase SlyD
L2_047_000M1_scaffold_264_26
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29811..30902
DNA (1092bp) protein (364aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Parabacteroides RepID=K5Z2Q1_9PORP
L2_047_000M1_scaffold_264_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30959..31432)
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Ribosomal RNA large subunit methyltransferase H n=3 Tax=Parabacteroides RepID=B7BBL4_9PORP
rRNA large subunit methyltransferase
L2_047_000M1_scaffold_264_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31523..31894
DNA (372bp) protein (124aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=B7BBL5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96187.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_264_29
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31916..32773
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DLL8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76856.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
nicotinate-nucleotide pyrophosphorylase
L2_047_000M1_scaffold_264_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32807..33382)
DNA (576bp) protein (192aa)
Bacterial transferase hexapeptide repeat protein n=2 Tax=Parabacteroides johnsonii RepID=B7BBL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09800.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hexapeptide transferase acetyltransferase
Displaying items 1-30 of 120 in total

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