ggKbase home page

L2_047_000M1_scaffold_285

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_285_1
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
DNA polymerase III subunit beta {ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00018259};; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
DNA polymerase III, beta subunit n=2 Tax=Parabacteroides RepID=N2ATJ0_9PORP
DNA polymerase III, beta subunit
L2_047_000M1_scaffold_285_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(417..965)
DNA (549bp) protein (183aa)
DNA polymerase III subunit beta {ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00018259};; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
DNA polymerase III, beta subunit n=2 Tax=Parabacteroides RepID=N2ATJ0_9PORP
DNA polymerase III subunit beta
L2_047_000M1_scaffold_285_3
unknown

Not on your lists

comp(1015..1134)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_047_000M1_scaffold_285_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1119..2393)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AMS6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS18638.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
transposase
L2_047_000M1_scaffold_285_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2888..3517
DNA (630bp) protein (210aa)
Resolvase, N-terminal domain protein n=3 Tax=Parabacteroides RepID=B7BBE7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07775.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
serine type site-specific recombinase Mpi
L2_047_000M1_scaffold_285_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3596..4123)
DNA (528bp) protein (176aa)
DJ-1/PfpI family protein n=2 Tax=Parabacteroides RepID=B7BBE6_9PORP
DJ-1/PfpI family protein {ECO:0000313|EMBL:EEC96247.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
protease I
L2_047_000M1_scaffold_285_7
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4290..4646
DNA (357bp) protein (119aa)
Transcriptional regulator, HxlR family n=3 Tax=Parabacteroides RepID=B7BBE5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79280.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
putative regulatory protein
L2_047_000M1_scaffold_285_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4729..6147
DNA (1419bp) protein (473aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y3W3_9PORP
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EKN07772.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RNA methyltransferase
L2_047_000M1_scaffold_285_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6155..7552
DNA (1398bp) protein (466aa)
Transglycosylase SLT domain protein n=2 Tax=Parabacteroides RepID=B7BBE1_9PORP
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EEC96264.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
glycoside hydrolase
L2_047_000M1_scaffold_285_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7549..8076)
DNA (528bp) protein (176aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBE0_9PORP
hypothetical protein
L2_047_000M1_scaffold_285_11
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8073..8813)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DTE8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79276.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
metal-dependent phosphoesterase
L2_047_000M1_scaffold_285_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8810..9148)
DNA (339bp) protein (113aa)
DRTGG domain protein n=2 Tax=Parabacteroides johnsonii RepID=B7BBD8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07768.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
thiamine biosynthesis protein ThiC
L2_047_000M1_scaffold_285_13
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9135..10511)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DKF5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79274.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
ferredoxin 2
L2_047_000M1_scaffold_285_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10514..10939)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z8U5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79273.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
anti-sigma regulatory factor
L2_047_000M1_scaffold_285_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10957..11301)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBD5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC96258.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_285_16
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11397..12239
DNA (843bp) protein (281aa)
pantothenate kinase (EC:2.7.1.33)
Pantothenate kinase n=3 Tax=Parabacteroides RepID=K5YXA2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79271.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_047_000M1_scaffold_285_17
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12504..13880
DNA (1377bp) protein (459aa)
Aminopeptidase P domain protein n=4 Tax=root RepID=B7BBD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79270.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Xaa-Pro aminopeptidase
L2_047_000M1_scaffold_285_18

Not on your lists

comp(13956..14813)
DNA (858bp) protein (286aa)
HGF-1 beta-lactamase n=1 Tax=uncultured organism RepID=C8C0E9_9ZZZZ
HGF-1 beta-lactamase {ECO:0000313|EMBL:ACT97382.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
beta-lactamase
L2_047_000M1_scaffold_285_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14946..16172
DNA (1227bp) protein (409aa)
Phosphoserine phosphatase SerB n=2 Tax=Parabacteroides RepID=K5Z8U2_9PORP
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:EKN07761.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
phosphoserine phosphatase
L2_047_000M1_scaffold_285_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16193..16495
DNA (303bp) protein (101aa)
Stress responsive A/B barrel domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBC9_9PORP
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:EEC96252.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_285_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16511..16984
DNA (474bp) protein (158aa)
Oxidoreductase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBC8_9PORP
Oxidoreductase {ECO:0000313|EMBL:EEC96251.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_285_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16989..17717)
DNA (729bp) protein (243aa)
Mg2+ transporter-C family protein n=3 Tax=Parabacteroides RepID=B7BBE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07758.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Mg2+ transport protein
L2_047_000M1_scaffold_285_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17736..19895)
DNA (2160bp) protein (720aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y3V1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07757.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
alpha-glycosidase
L2_047_000M1_scaffold_285_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20098..21009)
DNA (912bp) protein (304aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Dihydroorotate dehydrogenase n=2 Tax=Parabacteroides RepID=K5Z8T3_9PORP
dihydroorotate dehydrogenase 1B
L2_047_000M1_scaffold_285_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20997..21776)
DNA (780bp) protein (260aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Parabacteroides johnsonii RepID=B7BBC5_9PORP
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
dihydroorotate dehydrogenase electron transfer subunit
L2_047_000M1_scaffold_285_26
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21839..22288)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5YX96_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07754.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_285_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23289..24311)
DNA (1023bp) protein (341aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEC96276.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEC96276.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
DNA polymerase III, delta subunit n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBC2_9PORP
hypothetical protein
L2_047_000M1_scaffold_285_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24336..25112)
DNA (777bp) protein (259aa)
AMP nucleosidase (EC:3.2.2.4)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=K5Y3U6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN16099.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_047_000M1_scaffold_285_29
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25167..25616
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DPX9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78777.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_285_30
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25693..25878)
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BBB9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78778.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Displaying items 1-30 of 61 in total

View Taxonomy