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L2_047_000M1_scaffold_290

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Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_290_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17..1072)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82833.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_290_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1374..2081
DNA (708bp) protein (236aa)
Cyclic nucleotide-binding domain protein n=2 Tax=root RepID=R5DV76_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CCX82834.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
CarD family transcriptional regulator
L2_047_000M1_scaffold_290_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2149..2712
DNA (564bp) protein (188aa)
Putative manganese efflux pump MntP n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRC5_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted membrane protein
L2_047_000M1_scaffold_290_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2883..3836)
DNA (954bp) protein (318aa)
L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBL14841.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBL14841.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L-lactate dehydrogenase n=3 Tax=root RepID=D4L5E6_9FIRM
L2_047_000M1_scaffold_290_5
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4269..5111
DNA (843bp) protein (281aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1Z4_9FIRM
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CCX82837.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5114..6508
DNA (1395bp) protein (465aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.13 1.4.1.14)
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CBL14839.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBL14839.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBL14839.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBL14839.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5E4_9FIRM
L2_047_000M1_scaffold_290_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7020..8375
DNA (1356bp) protein (452aa)
K+ transport systems NAD-binding component n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRD0_9FIRM
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CCX82840.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
K+ transport systems, NAD-binding component
L2_047_000M1_scaffold_290_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8386..9831
DNA (1446bp) protein (482aa)
Trk-type K+ transport systems, membrane components n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5E2_9FIRM
Trk-type K+ transport systems, membrane components
Trk-type K+ transport systems, membrane components {ECO:0000313|EMBL:CBL14837.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_290_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10265..11365)
DNA (1101bp) protein (367aa)
Stage II sporulation protein P n=2 Tax=root RepID=R5E1Z7_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:CCX82842.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
spoIIP; Stage II sporulation protein P
L2_047_000M1_scaffold_290_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11459..12334)
DNA (876bp) protein (292aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
spore protease (EC:3.4.24.78)
Germination protease n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRM9_9FIRM
L2_047_000M1_scaffold_290_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12664..14316
DNA (1653bp) protein (551aa)
Cysteine protease n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DV87_9FIRM
Cysteine protease {ECO:0000313|EMBL:CCX82844.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Cysteine protease
L2_047_000M1_scaffold_290_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14954..16219
DNA (1266bp) protein (422aa)
Recombination protein MgsA n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E3U8_9FIRM
Recombination protein MgsA {ECO:0000313|EMBL:CCX82846.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Recombination protein MgsA
L2_047_000M1_scaffold_290_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16498..18126
DNA (1629bp) protein (543aa)
Uncharacterized protein n=2 Tax=root RepID=R5E201_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82847.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_290_14
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18165..20579
DNA (2415bp) protein (805aa)
Glycosidases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5D8_9FIRM
Glycosidases
Glycosidases {ECO:0000313|EMBL:CBL14833.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_290_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20897..21364)
DNA (468bp) protein (156aa)
Acetyltransferase (GNAT) family n=2 Tax=root RepID=R5DV91_9FIRM
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CCX82849.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Acetyltransferase (GNAT) family.
L2_047_000M1_scaffold_290_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21675..22028)
DNA (354bp) protein (118aa)
Firmicute plasmid replication protein (RepL) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRE0_9FIRM
Firmicute plasmid replication protein (RepL) {ECO:0000313|EMBL:CCX82850.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Firmicute plasmid replication protein (RepL).
L2_047_000M1_scaffold_290_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22974..23282
DNA (309bp) protein (103aa)
Thioredoxin n=2 Tax=Ruminococcus RepID=D4L5D4_9FIRM
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23349..24794)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82853.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_290_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25145..25495)
DNA (351bp) protein (117aa)
Putative transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DV96_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CCX82854.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25653..25868
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82855.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26006..27574
DNA (1569bp) protein (523aa)
FOG: FHA domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E210_9FIRM
FOG: FHA domain {ECO:0000313|EMBL:CCX82857.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
FOG: FHA domain
L2_047_000M1_scaffold_290_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27591..28358
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82859.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
protein serine/threonine phosphatase
L2_047_000M1_scaffold_290_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28363..30063
DNA (1701bp) protein (567aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82860.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30063..30629
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E3W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82861.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30695..31156
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E215_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82862.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31160..37990
DNA (6831bp) protein (2277aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82718.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_290_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38066..39949
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82717.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Ser/Thr protein kinase
L2_047_000M1_scaffold_290_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39963..40094
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E3F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82716.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40081..40410
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DR19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82715.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_290_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40425..41945
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82714.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
Displaying items 1-30 of 70 in total

View Taxonomy