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L2_047_000M1_scaffold_294

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_294_1
unknown

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2..85
DNA (84bp) protein (28aa)

This feature has no annotations

L2_047_000M1_scaffold_294_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(263..1174)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z7P2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26497.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L2_047_000M1_scaffold_294_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1197..1736)
DNA (540bp) protein (180aa)
transcriptional regulator n=1 Tax=Alistipes sp. JC136 RepID=UPI000288EF29
Uncharacterized protein {ECO:0000313|EMBL:EDO53961.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
transcriptional regulator UpxY-like protein
L2_047_000M1_scaffold_294_4
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2680..6342
DNA (3663bp) protein (1221aa)
CRISPR-associated protein Csn1 family n=1 Tax=Alistipes sp. CAG:268 RepID=R6VIK8_9BACT
CRISPR-associated protein Csn1 family {ECO:0000313|EMBL:CDC96800.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
csn1; Csn1 family CRISPR-associated protein
L2_047_000M1_scaffold_294_5
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6336..7223
DNA (888bp) protein (296aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKV6_9BACT
CRISPR-associated protein Cas1
L2_047_000M1_scaffold_294_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9240..9914)
DNA (675bp) protein (225aa)
recombinase XerD n=1 Tax=Alistipes sp. JC136 RepID=UPI000289BCFD
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CCZ96833.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
site-specific recombinase XerD
L2_047_000M1_scaffold_294_7
unknown

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9931..10218
DNA (288bp) protein (96aa)

This feature has no annotations

L2_047_000M1_scaffold_294_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10311..11645)
DNA (1335bp) protein (445aa)
7-keto-8-aminopelargonate synthetase and related enzymes (EC:2.3.1.29)
7-keto-8-aminopelargonate synthetase and related enzymes n=2 Tax=Alistipes RepID=D4IKV7_9BACT
7-keto-8-aminopelargonate synthetase and related enzymes {ECO:0000313|EMBL:CCZ97303.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_294_9
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11765..12919)
DNA (1155bp) protein (385aa)
Transporter dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WXS9_9BACT
Transporter dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:CCZ97302.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Na+/H+ dicarboxylate symporter
L2_047_000M1_scaffold_294_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12988..13761
DNA (774bp) protein (258aa)
Fe-S oxidoreductases n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKW3_9BACT
Fe-S oxidoreductases
Fe-S oxidoreductases {ECO:0000313|EMBL:CBK63575.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_294_11
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13774..14535
DNA (762bp) protein (254aa)
UPF0246 protein BN696_00202 n=1 Tax=Alistipes sp. CAG:53 RepID=R5W3S7_9BACT
hypothetical protein
UPF0246 protein BN696_00202 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_294_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14545..15117)
DNA (573bp) protein (191aa)
Lipocalin family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y2V7_9BACT
Lipocalin family protein {ECO:0000313|EMBL:CDD25614.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Cell division inhibitor
L2_047_000M1_scaffold_294_13
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15157..17037)
DNA (1881bp) protein (627aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WAZ0_9BACT
L2_047_000M1_scaffold_294_14
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17209..17916
DNA (708bp) protein (236aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Uridylate kinase n=2 Tax=Alistipes RepID=D4IKW6_9BACT
L2_047_000M1_scaffold_294_15
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17921..18496
DNA (576bp) protein (192aa)
Peroxiredoxin n=1 Tax=Alistipes sp. CAG:53 RepID=R5WXS3_9BACT
Peroxiredoxin {ECO:0000313|EMBL:CCZ97297.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Peroxiredoxin
L2_047_000M1_scaffold_294_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18509..19066
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=2 Tax=Alistipes RepID=D4IKW8_9BACT
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_294_17
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19569..21176)
DNA (1608bp) protein (536aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:CBK63581.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKW9_9BACT
L2_047_000M1_scaffold_294_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21768..22901
DNA (1134bp) protein (378aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Alistipes sp. CAG:53 RepID=R5WAY7_9BACT
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CCZ97294.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_294_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23036..27283
DNA (4248bp) protein (1416aa)
alpha-glucan phosphorylases (EC:2.4.1.1 2.4.1.11)
Alpha-glucan phosphorylases {ECO:0000313|EMBL:CBK63583.1}; EC=2.4.1.1 {ECO:0000313|EMBL:CBK63583.1};; EC=2.4.1.11 {ECO:0000313|EMBL:CBK63583.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Alpha-glucan phosphorylases n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKX1_9BACT
L2_047_000M1_scaffold_294_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27384..29525
DNA (2142bp) protein (714aa)
Glycogen debranching enzyme n=1 Tax=Alistipes sp. CAG:53 RepID=R5WXR9_9BACT
Glycogen debranching enzyme {ECO:0000313|EMBL:CCZ97292.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Glycogen debranching enzyme
L2_047_000M1_scaffold_294_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29708..31015
DNA (1308bp) protein (436aa)
Glycosyltransferase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKX3_9BACT
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBK63585.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_294_22
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31024..32241
DNA (1218bp) protein (406aa)
Alpha-amylase/alpha-mannosidase (EC:3.2.1.1)
Alpha-amylase/alpha-mannosidase n=1 Tax=Alistipes sp. CAG:53 RepID=R5W3R8_9BACT
Alpha-amylase/alpha-mannosidase {ECO:0000313|EMBL:CCZ97290.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_294_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32368..33843
DNA (1476bp) protein (492aa)
Glutathione synthase/Ribosomal protein S6 modification enzyme (Glutaminyl transferase) n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKX5_9BACT
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Glutathione synthase/Ribosomal protein S6 modification enzyme (Glutaminyl transferase) {ECO:0000313|EMBL:CBK63587.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_294_24
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33840..34313
DNA (474bp) protein (158aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKX6_9BACT
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CBK63588.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_294_25
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34285..34650)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WXR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97287.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Predicted transcriptional regulators
L2_047_000M1_scaffold_294_26
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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34799..35326
DNA (528bp) protein (176aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IKX7_9BACT
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CBK63589.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_294_27
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35500..36414)
DNA (915bp) protein (305aa)
AraC-type DNA-binding domain-containing proteins n=2 Tax=Alistipes RepID=D4IKX8_9BACT
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBK63590.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_294_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36480..37358)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WAX9_9BACT
conserved protein of unknown function cotranscribed with Bmr (bmrU)
Uncharacterized protein {ECO:0000313|EMBL:CBK63591.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_294_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37367..38377)
DNA (1011bp) protein (337aa)
Membrane-associated lipoprotein involved in thiamine biosynthesis n=1 Tax=Alistipes sp. CAG:53 RepID=R5W2B6_9BACT
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:CCZ97283.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L2_047_000M1_scaffold_294_30
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


38568..38840
DNA (273bp) protein (91aa)
30S ribosomal protein S15 n=2 Tax=Alistipes RepID=D4IKY1_9BACT
SSU ribosomal protein S15P
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Displaying items 1-30 of 62 in total

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