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L2_047_000M1_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_338_1
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(94..564)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DCV8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76629.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_338_2
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(613..1002)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BE38_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76628.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_338_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1049..1600)
DNA (552bp) protein (184aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Parabacteroides RepID=K5ZZF7_9PORP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKN08778.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RNA polymerase ECF-type sigma factor
L2_047_000M1_scaffold_338_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1995..3632)
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=2 Tax=Parabacteroides RepID=K5Y6J8_9PORP
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
groEL; chaperonin GroEL
L2_047_000M1_scaffold_338_5
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3704..3973)
DNA (270bp) protein (90aa)
10 kDa chaperonin n=6 Tax=Parabacteroides RepID=A7ACK3_9PORP
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
groES; co-chaperonin GroES
L2_047_000M1_scaffold_338_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4254..5609)
DNA (1356bp) protein (452aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Parabacteroides RepID=B7BE45_9PORP
L2_047_000M1_scaffold_338_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5656..6342)
DNA (687bp) protein (229aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z001_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08774.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_338_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6466..7737)
DNA (1272bp) protein (424aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=3 Tax=Parabacteroides RepID=B7BE47_9PORP
L2_047_000M1_scaffold_338_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7767..8201)
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Y6J6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08772.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L2_047_000M1_scaffold_338_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8286..8969)
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7BE49_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08771.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_338_11
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8974..11007)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5D8V0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76618.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
dipeptidyl-peptidase III
L2_047_000M1_scaffold_338_12
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11188..11334)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BE51_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76617.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_047_000M1_scaffold_338_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11427..13217
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZZE9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08768.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
aminopeptidase
L2_047_000M1_scaffold_338_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13303..13824
DNA (522bp) protein (174aa)
Bacterial transferase hexapeptide repeat protein n=3 Tax=Parabacteroides RepID=B7BE53_9PORP
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEC95334.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
acetyltransferase
L2_047_000M1_scaffold_338_15
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13825..14199
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DCU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76614.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
beta-lactamase
L2_047_000M1_scaffold_338_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14157..14984
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZBM9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08766.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
beta-lactamase
L2_047_000M1_scaffold_338_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14991..15647
DNA (657bp) protein (219aa)
phosphatase (EC:3.1.3.18)
HAD hydrolase, family IA, variant 1 n=2 Tax=Parabacteroides johnsonii RepID=B7BE55_9PORP
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EEC95336.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L2_047_000M1_scaffold_338_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15641..16231)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BE56_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95337.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_338_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16235..16516)
DNA (282bp) protein (94aa)
HTH DNA binding domain protein n=2 Tax=Parabacteroides johnsonii RepID=B7BE57_9PORP
HTH DNA binding domain protein {ECO:0000313|EMBL:EEC95338.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_338_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16773..18170
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y6I6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08762.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
aminopeptidase
L2_047_000M1_scaffold_338_21
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18693..19919)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DCU2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76609.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
glycosyl transferase family protein
L2_047_000M1_scaffold_338_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19984..21498)
DNA (1515bp) protein (505aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=2 Tax=Parabacteroides johnsonii RepID=B7BE63_9PORP
L2_047_000M1_scaffold_338_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21736..23778
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YZY6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08759.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
membrane-associated HD superfamily hydrolase
L2_047_000M1_scaffold_338_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23741..24244)
DNA (504bp) protein (168aa)
Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=Parabacteroides johnsonii RepID=B7BE65_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08758.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
protein-tyrosine-phosphatase
L2_047_000M1_scaffold_338_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24284..26743)
DNA (2460bp) protein (820aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Primosomal protein N n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BE66_9PORP
primosomal protein N'
L2_047_000M1_scaffold_338_26
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26860..27447)
DNA (588bp) protein (196aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BE67_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95348.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_338_27
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28118..28933)
DNA (816bp) protein (272aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
N-acetylmuramic acid 6-phosphate etherase n=2 Tax=Parabacteroides RepID=B7BE68_9PORP
N-acetylmuramic acid-6-phosphate etherase
L2_047_000M1_scaffold_338_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28979..30097)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BE69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95350.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_338_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30127..31407)
DNA (1281bp) protein (427aa)
Acetyl xylan esterase (AXE1) n=3 Tax=Parabacteroides RepID=B7BE70_9PORP
Acetyl xylan esterase (AXE1) {ECO:0000313|EMBL:EEC95351.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
cephalosporin-C deacetylase
L2_047_000M1_scaffold_338_30
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31437..32276)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5D8N1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76600.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
ATPase
Displaying items 1-30 of 54 in total

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