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L2_047_000M1_scaffold_340

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_340_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

601..1344
DNA (744bp) protein (248aa)
signal peptidase I, archaeal type (EC:3.4.21.89)
Signal peptidase I archaeal type n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E328_9FIRM
Signal peptidase I archaeal type {ECO:0000313|EMBL:CCX82546.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_340_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1570..2382
DNA (813bp) protein (271aa)
HAD-superfamily hydrolase, subfamily IIB n=2 Tax=Ruminococcus RepID=D4L5J3_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL14888.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2644..4899
DNA (2256bp) protein (752aa)
Glycosidases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E190_9FIRM
Glycosidases {ECO:0000313|EMBL:CCX82542.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Glycosidases
L2_047_000M1_scaffold_340_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5201..6565
DNA (1365bp) protein (455aa)
Citrate synthase (EC:2.3.3.1 2.3.3.5)
Citrate synthase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E324_9FIRM
Citrate synthase {ECO:0000313|EMBL:CCX82541.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_340_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6852..7292)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5J0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14885.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7590..8528
DNA (939bp) protein (313aa)
Predicted permeases n=2 Tax=Ruminococcus RepID=D4L5I9_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBL14884.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_7
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8868..9869
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14883.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10249..11043
DNA (795bp) protein (265aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I7_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL14882.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11261..12052
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5E317_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14881.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12768..13973)
DNA (1206bp) protein (402aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I4_9FIRM
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis {ECO:0000313|EMBL:CBL14879.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14292..14564)
DNA (273bp) protein (91aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4H5_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CCX83672.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_340_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14852..16372
DNA (1521bp) protein (507aa)
Transglutaminase-like superfamily n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXN9_9FIRM
Transglutaminase-like superfamily {ECO:0000313|EMBL:CCX83674.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Transglutaminase-like superfamily.
L2_047_000M1_scaffold_340_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16786..17970
DNA (1185bp) protein (395aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Alanine racemase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I2_9FIRM
L2_047_000M1_scaffold_340_14
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17972..19000
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14876.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19962..21206
DNA (1245bp) protein (415aa)
Fucose 4-O-acetylase and related acetyltransferases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1H5_9FIRM
Fucose 4-O-acetylase and related acetyltransferases {ECO:0000313|EMBL:CCX82056.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Fucose 4-O-acetylase and related acetyltransferases
L2_047_000M1_scaffold_340_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21418..22131
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DT88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82059.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_340_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22167..23027
DNA (861bp) protein (287aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
NAD(P)H-hydrate epimerase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1I0_9FIRM
yjeF N-terminal region
L2_047_000M1_scaffold_340_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23057..23890
DNA (834bp) protein (278aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPG5_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCX82063.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
AraC-type DNA-binding domain-containing proteins
L2_047_000M1_scaffold_340_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24085..24930)
DNA (846bp) protein (282aa)
Predicted phosphohydrolases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DT93_9FIRM
Predicted phosphohydrolases {ECO:0000313|EMBL:CCX82064.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted phosphohydrolases
L2_047_000M1_scaffold_340_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25171..27048
DNA (1878bp) protein (626aa)
Predicted nucleoside-diphosphate sugar epimerases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DP79_9FIRM
Predicted nucleoside-diphosphate sugar epimerases {ECO:0000313|EMBL:CCX82065.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted nucleoside-diphosphate sugar epimerases
L2_047_000M1_scaffold_340_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27067..28896
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPH0_9FIRM
L2_047_000M1_scaffold_340_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29437..31416
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DT94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82069.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_340_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31442..32707
DNA (1266bp) protein (422aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DP82_9FIRM
L2_047_000M1_scaffold_340_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32889..33869
DNA (981bp) protein (327aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
Isopropylmalate/homocitrate/citramalate synthases {ECO:0000313|EMBL:CBL14865.1}; EC=4.1.3.39 {ECO:0000313|EMBL:CBL14865.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Isopropylmalate/homocitrate/citramalate synthases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5H0_9FIRM
L2_047_000M1_scaffold_340_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34118..35053
DNA (936bp) protein (312aa)
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Orotidine 5'-phosphate decarboxylase n=2 Tax=Ruminococcus RepID=D4L5G9_9FIRM
L2_047_000M1_scaffold_340_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35206..36291
DNA (1086bp) protein (362aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Phosphoserine aminotransferase n=3 Tax=root RepID=D4L5G8_9FIRM
L2_047_000M1_scaffold_340_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36395..37549
DNA (1155bp) protein (385aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
Phosphoglycerate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CBL14862.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CBL14862.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Phosphoglycerate dehydrogenase and related dehydrogenases n=2 Tax=Ruminococcus RepID=D4L5G7_9FIRM
L2_047_000M1_scaffold_340_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37783..39117)
DNA (1335bp) protein (445aa)
Na+-driven multidrug efflux pump n=2 Tax=root RepID=D4L5G6_9FIRM
Na+-driven multidrug efflux pump
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CBL14861.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_340_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39167..39904
DNA (738bp) protein (246aa)
HAD-superfamily hydrolase subfamily IA variant 3 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DP89_9FIRM
HAD-superfamily hydrolase subfamily IA variant 3 {ECO:0000313|EMBL:CCX82080.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_340_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40266..42059
DNA (1794bp) protein (598aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1J7_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCX82081.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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