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L2_047_000M1_scaffold_359

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_359_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1620
DNA (1620bp) protein (540aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZC12_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74302.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1735..2415
DNA (681bp) protein (227aa)
Transcriptional regulator, GntR family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JL11_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK94308.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_359_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2611..3012
DNA (402bp) protein (134aa)
Hemerythrin-like metal-binding domain n=4 Tax=Eubacterium RepID=D4JL10_9FIRM
hemerythrin-like metal-binding domain
Uncharacterized protein {ECO:0000313|EMBL:ACR74305.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3388..4794
DNA (1407bp) protein (469aa)
Response regulator PleD n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UMN1_9FIRM
Response regulator PleD {ECO:0000313|EMBL:CDC72027.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_359_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4864..5172)
DNA (309bp) protein (103aa)
Branched-chain amino acid transport protein (AzlD) n=2 Tax=Eubacterium rectale RepID=D6E1W0_9FIRM
Branched-chain amino acid transport protein (AzlD).
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:CBK89400.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_047_000M1_scaffold_359_6
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5217..5918)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TIG7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC72020.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_047_000M1_scaffold_359_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6223..6660
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TVX3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC72016.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_047_000M1_scaffold_359_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6676..7653
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TF48_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74312.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7683..8828
DNA (1146bp) protein (382aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:CBK94296.1}; EC=2.7.1.31 {ECO:0000313|EMBL:CBK94296.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Glycerate kinase n=2 Tax=Eubacterium rectale RepID=D4JKZ9_9FIRM
L2_047_000M1_scaffold_359_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8923..10362
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Proline--tRNA ligase n=4 Tax=Eubacterium RepID=SYP_EUBR3
prolyl-tRNA synthetase
L2_047_000M1_scaffold_359_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10378..11718
DNA (1341bp) protein (447aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.4.- 3.1.3.-)
Uncharacterized domain HDIG {ECO:0000313|EMBL:CBK94294.1}; EC=2.7.7.21 {ECO:0000313|EMBL:CBK94294.1};; EC=2.7.7.25 {ECO:0000313|EMBL:CBK94294.1};; EC=3.1.3.- {ECO:0000313|EMBL:CBK94294.1};; EC=3.1.4.- {ECO:0000313|EMBL:CBK94294.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Uncharacterized domain HDIG n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKZ7_9FIRM
L2_047_000M1_scaffold_359_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11772..12740
DNA (969bp) protein (323aa)
Spore coat protein CotS related n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TVW2_9FIRM
Spore coat protein CotS related {ECO:0000313|EMBL:CDC72001.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
spore coat protein CotS related
L2_047_000M1_scaffold_359_13
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12881..14179
DNA (1299bp) protein (433aa)
PEGA domain n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UML4_9FIRM
PEGA domain {ECO:0000313|EMBL:CDC71997.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
PEGA domain.
L2_047_000M1_scaffold_359_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14333..14605
DNA (273bp) protein (91aa)
DNA-binding protein HU n=4 Tax=Eubacterium RepID=C4ZC28_EUBR3
Bacterial nucleoid DNA-binding protein
DNA-binding protein HU {ECO:0000313|EMBL:ACR74318.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_15
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14735..14974
DNA (240bp) protein (80aa)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) n=4 Tax=Eubacterium RepID=D4JKZ4_9FIRM
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
Uncharacterized protein {ECO:0000313|EMBL:CDC71991.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_047_000M1_scaffold_359_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15084..15368
DNA (285bp) protein (95aa)
Sporulation protein YabP n=4 Tax=Eubacterium RepID=D4JKZ3_9FIRM
sporulation protein YabP
Uncharacterized protein {ECO:0000313|EMBL:ACR74321.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15386..15679
DNA (294bp) protein (98aa)
Septum formation initiator n=3 Tax=Eubacterium rectale RepID=D4JKZ2_9FIRM
Septum formation initiator.
Uncharacterized protein {ECO:0000313|EMBL:ACR74322.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15764..17605
DNA (1842bp) protein (614aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CBK89417.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CBK89417.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Stage II sporulation protein E (SpoIIE) n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1X7_9FIRM
L2_047_000M1_scaffold_359_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17605..19149
DNA (1545bp) protein (515aa)
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1X8_9FIRM
L2_047_000M1_scaffold_359_20
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19127..19672
DNA (546bp) protein (182aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=4 Tax=Eubacterium RepID=C4ZC35_EUBR3
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDC71969.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_047_000M1_scaffold_359_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19708..21537
DNA (1830bp) protein (610aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TI97_9FIRM
ATP-dependent metalloprotease FtsH
L2_047_000M1_scaffold_359_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22315..24501)
DNA (2187bp) protein (729aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZC38_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74328.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24485..25498)
DNA (1014bp) protein (338aa)
Alanine racemase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZC39_EUBR3
alanine racemase
Alanine racemase {ECO:0000313|EMBL:ACR74329.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_24
unknown

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25641..25751
DNA (111bp) protein (37aa)

This feature has no annotations

L2_047_000M1_scaffold_359_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25753..27255
DNA (1503bp) protein (501aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4 alpha-glucanotransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UME1_9FIRM
L2_047_000M1_scaffold_359_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27331..28596
DNA (1266bp) protein (422aa)
Putative sugar-binding secreted protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZC42_EUBR3
putative sugar-binding secreted protein
Putative sugar-binding secreted protein {ECO:0000313|EMBL:ACR74332.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_047_000M1_scaffold_359_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28699..30078
DNA (1380bp) protein (460aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Eubacterium rectale RepID=D6E1Y2_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK89422.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_047_000M1_scaffold_359_28
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30078..30965
DNA (888bp) protein (296aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TEU3_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC71938.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_047_000M1_scaffold_359_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31191..32885
DNA (1695bp) protein (565aa)
Glycosidases (EC:3.2.1.1)
Glycosidases {ECO:0000313|EMBL:CBK89424.1}; EC=3.2.1.1 {ECO:0000313|EMBL:CBK89424.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Glycosidases n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1Y4_9FIRM
L2_047_000M1_scaffold_359_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32973..33704)
DNA (732bp) protein (244aa)
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267, ECO:0000313|EMBL:CBK94278.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKY1_9FIRM
Displaying items 1-30 of 58 in total

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