ggKbase home page

L2_047_000M1_scaffold_378

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_378_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..606)
DNA (606bp) protein (202aa)
ABC-type (Unclassified) transport system, ATPase component n=3 Tax=Alistipes RepID=I3YHW2_ALIFI
ABC transporter ATPase
ABC-type (Unclassified) transport system, ATPase component {ECO:0000313|EMBL:AFL76580.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_2
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(907..2130)
DNA (1224bp) protein (408aa)
Phosphate-selective porin O and P n=2 Tax=Alistipes RepID=I3YHW1_ALIFI
Phosphate-selective porin O and P
Phosphate-selective porin O and P {ECO:0000313|EMBL:AFL76579.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2400..4592
DNA (2193bp) protein (731aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFR56610.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFR56610.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
ATP-dependent DNA helicase RecQ n=1 Tax=Alistipes sp. HGB5 RepID=E4MEK7_9BACT
ATP-dependent DNA helicase RecQ
L2_047_000M1_scaffold_378_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4669..4887
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YHV9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75393.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5125..5349
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHV8_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76576.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_6
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5676..5879
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MEL0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ75395.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
acetyltransferase
L2_047_000M1_scaffold_378_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


5881..7032
DNA (1152bp) protein (384aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Alistipes RepID=I3YHV7_ALIFI
dimethyladenosine transferase
L2_047_000M1_scaffold_378_8
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7271..8575)
DNA (1305bp) protein (435aa)
Putative Zn-dependent peptidase n=2 Tax=Alistipes RepID=I3YHV6_ALIFI
Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:CCZ75397.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8572..9810)
DNA (1239bp) protein (413aa)
Peptidase M16 inactive domain protein n=3 Tax=Alistipes RepID=E4MEL3_9BACT
Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AFL76573.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10547..14080
DNA (3534bp) protein (1178aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Alistipes sp. HGB5 RepID=E4MEL5_9BACT
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
L2_047_000M1_scaffold_378_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14279..15055
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEL6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56569.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
S1/P1 Nuclease.
L2_047_000M1_scaffold_378_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15603..16490
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHV2_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76570.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16719..17147
DNA (429bp) protein (143aa)
Heat shock protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHV1_ALIFI
heat shock protein
Heat shock protein {ECO:0000313|EMBL:AFL76569.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_14
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(17814..18074)
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=4 Tax=Alistipes RepID=I3YHV0_ALIFI
50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(18095..18406)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=4 Tax=Alistipes RepID=I3YHU9_ALIFI
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18514..18930
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEV4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR56508.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L2_047_000M1_scaffold_378_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18927..19874
DNA (948bp) protein (316aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YHU7_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ77550.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19868..20824
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHU6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76564.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_19
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20843..21727
DNA (885bp) protein (295aa)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EFR56489.1}; EC=3.1.3.7 {ECO:0000313|EMBL:EFR56489.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase (EC:3.1.3.7)
3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase n=3 Tax=Alistipes RepID=I3YHU5_ALIFI
L2_047_000M1_scaffold_378_20
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21974..22513)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UGM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ77418.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_047_000M1_scaffold_378_21
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22557..22826)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHU3_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76561.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_22
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22984..24294
DNA (1311bp) protein (437aa)
K+ transport system, NAD-binding component n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHU2_ALIFI
K+ transport system, NAD-binding component
K+ transport system, NAD-binding component {ECO:0000313|EMBL:AFL76560.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_000M1_scaffold_378_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24368..25840
DNA (1473bp) protein (491aa)
GH3 auxin-responsive promoter-binding protein n=2 Tax=Alistipes RepID=I3YHU1_ALIFI
GH3 auxin-responsive promoter-binding protein
GH3 auxin-responsive promoter-binding protein {ECO:0000313|EMBL:CCZ77415.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_24
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25929..26543
DNA (615bp) protein (205aa)
Deoxynucleoside kinase n=3 Tax=Alistipes RepID=I3YHU0_ALIFI
deoxynucleoside kinase
Deoxynucleoside kinase {ECO:0000313|EMBL:CCZ77414.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26547..27989
DNA (1443bp) protein (481aa)
NOL1/NOP2/sun family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEW3_9BACT
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EFR56500.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
tRNA/rRNA cytosine-C5-methylase
L2_047_000M1_scaffold_378_26
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27992..28564
DNA (573bp) protein (191aa)
Putative transcriptional regulator n=2 Tax=Alistipes RepID=I3YHT8_ALIFI
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CCZ77412.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_27
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28746..29531
DNA (786bp) protein (262aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YHT7_ALIFI
dinuclear metal center protein
L2_047_000M1_scaffold_378_28
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29555..30316
DNA (762bp) protein (254aa)
Zn-ribbon protein, possibly nucleic acid-binding protein n=3 Tax=Alistipes RepID=I3YHT6_ALIFI
Zn-ribbon protein, possibly nucleic acid-binding protein
Zn-ribbon protein possibly nucleic acid-binding protein {ECO:0000313|EMBL:CCZ77410.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_000M1_scaffold_378_29
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30383..30832)
DNA (450bp) protein (150aa)
Cupin domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MEW7_9BACT
Cupin domain protein {ECO:0000313|EMBL:EFR56611.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
cupin domain-containing protein
L2_047_000M1_scaffold_378_30
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31133..32713
DNA (1581bp) protein (527aa)
NAD+ synthetase n=2 Tax=Alistipes RepID=I3YHT4_ALIFI
NAD+ synthetase
NAD+ synthetase {ECO:0000313|EMBL:AFL76552.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Displaying items 1-30 of 66 in total

View Taxonomy