ggKbase home page

L2_047_000M1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_393_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(147..2822)
DNA (2676bp) protein (892aa)
Bacterial Ig-like domain (Group 3) n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Z5_9CLOT
Bacterial Ig-like domain (Group 3) {ECO:0000313|EMBL:CDD74931.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Bacterial Ig-like domain (group 3).
L2_047_000M1_scaffold_393_2
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3091..3483)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7APS3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58547.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L2_047_000M1_scaffold_393_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3566..4285
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74930.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_393_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4286..5131)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74929.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_393_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5158..6828)
DNA (1671bp) protein (557aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Glutamine--tRNA ligase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC84_9CLOT
glutaminyl-tRNA synthetase
L2_047_000M1_scaffold_393_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6893..7381)
DNA (489bp) protein (163aa)
Cell Wall Hydrolase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB23_9CLOT
Cell Wall Hydrolase {ECO:0000313|EMBL:CDD74927.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
cell wall hydrolase SleB
L2_047_000M1_scaffold_393_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7566..8339)
DNA (774bp) protein (258aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Z2_9CLOT
1-(5-phosphoribosyl)-5-((5'-phosphoribosylamino)m ethylideneamino)imidazole-4-carboxamide isomerase {ECO:0000313|EMBL:CDD74926.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_393_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8355..9839)
DNA (1485bp) protein (495aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAE8_9CLOT
Threonine synthase {ECO:0000313|EMBL:CDD74925.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_393_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9939..10583)
DNA (645bp) protein (215aa)
Cell wall hydrolase SleB n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9T1_9CLOT
Cell wall hydrolase SleB {ECO:0000313|EMBL:CDD74924.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
cell wall hydrolase SleB
L2_047_000M1_scaffold_393_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10726..11520
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CC79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74923.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_393_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11504..11833)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=root RepID=R7CB18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74922.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_393_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11847..12332)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74921.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
VanZ family protein
L2_047_000M1_scaffold_393_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12366..14804)
DNA (2439bp) protein (813aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAE4_9CLOT
L2_047_000M1_scaffold_393_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14817..15836)
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9S7_9CLOT
phenylalanyl-tRNA synthetase subunit alpha
L2_047_000M1_scaffold_393_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16450..18261)
DNA (1812bp) protein (604aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4S7_9CLOT
Methyl-accepting chemotaxis sensory transducer with Cache sensor {ECO:0000313|EMBL:CDD73111.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
methyl-accepting chemotaxis sensory transducer with Cache sensor
L2_047_000M1_scaffold_393_16
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18766..19875)
DNA (1110bp) protein (370aa)
Endo-1,4-beta-xylanase {ECO:0000256|RuleBase:RU362015}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU362015};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Endo-1,4-beta-xylanase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C559_9CLOT
endo-1,4-beta-xylanase
L2_047_000M1_scaffold_393_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20065..20946
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4M7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73109.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ribonuclease BN
L2_047_000M1_scaffold_393_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20897..22678)
DNA (1782bp) protein (594aa)
SpoIID/LytB domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C714_9CLOT
SpoIID/LytB domain protein {ECO:0000313|EMBL:CDD73108.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
SpoIID/LytB domain-containing protein
L2_047_000M1_scaffold_393_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22729..23703)
DNA (975bp) protein (325aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5R8_9CLOT
L2_047_000M1_scaffold_393_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23826..24353)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4S2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73106.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_393_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24344..25006)
DNA (663bp) protein (221aa)
DnaJ domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C555_9CLOT
DnaJ domain protein {ECO:0000313|EMBL:CDD73105.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_047_000M1_scaffold_393_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25006..25821)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73104.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_393_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25876..26310)
DNA (435bp) protein (145aa)
Zn-finger containing protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C710_9CLOT
Zn-finger containing protein {ECO:0000313|EMBL:CDD73103.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_393_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26366..26590)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5R2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73102.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_393_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26682..27857
DNA (1176bp) protein (392aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Alpha-galactosidase n=2 Tax=root RepID=R7C4R7_9CLOT
alpha-galactosidase
L2_047_000M1_scaffold_393_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28134..29663)
DNA (1530bp) protein (510aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=root RepID=R7C551_9CLOT
L2_047_000M1_scaffold_393_27
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29771..31405)
DNA (1635bp) protein (545aa)
AMP-binding enzyme n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4L8_9CLOT
AMP-binding enzyme {ECO:0000313|EMBL:CDD73099.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_393_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31441..32112)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C706_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73098.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
haloacid dehalogenase superfamily
L2_047_000M1_scaffold_393_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32163..32939)
DNA (777bp) protein (259aa)
GDSL-like Lipase/Acylhydrolase family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5Q6_9CLOT
GDSL-like Lipase/Acylhydrolase family protein {ECO:0000313|EMBL:CDD73097.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_393_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33034..33771)
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein BN737_01697 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4R3_9CLOT
Probable transcriptional regulatory protein BN737_01697 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
conserved hypothetical protein TIGR01033
Displaying items 1-30 of 74 in total

View Taxonomy