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L2_047_000M1_scaffold_394

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_394_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1947)
DNA (1947bp) protein (649aa)
Helicase C-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K6_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEU98216.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA or RNA helicases of superfamily II
L2_047_000M1_scaffold_394_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2170..2925)
DNA (756bp) protein (252aa)
Uncharacterized conserved protein (DUF2276) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCT1_9FIRM
Uncharacterized conserved protein (DUF2276).
Uncharacterized conserved protein (DUF2276) {ECO:0000313|EMBL:CBL02644.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_394_3
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(2922..4025)
DNA (1104bp) protein (368aa)
CRISPR-associated RAMP protein Csm5 family n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H7T2_9FIRM
CRISPR-associated RAMP protein Csm5 family {ECO:0000313|EMBL:CDB29556.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
CRISPR-associated RAMP protein, Csm5 family
L2_047_000M1_scaffold_394_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4022..4987)
DNA (966bp) protein (322aa)
CRISPR-associated RAMP protein, Csm4 family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCT3_9FIRM
CRISPR-associated RAMP protein, Csm4 family
CRISPR-associated RAMP protein, Csm4 family {ECO:0000313|EMBL:CBL02646.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_394_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4968..5633)
DNA (666bp) protein (222aa)
CRISPR-associated protein, Csm3 family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCT4_9FIRM
CRISPR-associated protein, Csm3 family
CRISPR-associated protein, Csm3 family {ECO:0000313|EMBL:CBL02647.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_394_6
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(5638..6171)
DNA (534bp) protein (178aa)
CRISPR-associated protein Csm2 family n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EJL7_9FIRM
CRISPR type III-a/mtube-associated protein csm2 {ECO:0000313|EMBL:CDB29559.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
CRISPR-associated protein, Csm2 family
L2_047_000M1_scaffold_394_7
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(6155..8539)
DNA (2385bp) protein (795aa)
CRISPR-associated protein cas10/csm1, subtype III-a/mtube n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PWQ4_9BACT
CRISPR-associated protein cas10/csm1, subtype III-a/mtube {ECO:0000313|EMBL:EHL65972.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
CRISPR-associated protein, Csm1 family
L2_047_000M1_scaffold_394_8
unknown

Not on your lists

8832..9089
DNA (258bp) protein (86aa)

This feature has no annotations

L2_047_000M1_scaffold_394_9
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(9199..9567)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2UNB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERL04612.1}; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
CRISPR-associated protein, putative
L2_047_000M1_scaffold_394_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10167..10775
DNA (609bp) protein (203aa)
CRISPR-associated protein (Cas_TM1812) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCS8_9FIRM
CRISPR-associated protein (cas_TM1812).
CRISPR-associated protein (Cas_TM1812) {ECO:0000313|EMBL:CBL02641.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_394_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10782..11795
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCS9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL02642.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_394_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11797..13242
DNA (1446bp) protein (482aa)
CRISPR-associated protein (Cas_TM1812) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCT0_9FIRM
CRISPR-associated protein (cas_TM1812).
CRISPR-associated protein (Cas_TM1812) {ECO:0000313|EMBL:CBL02643.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_394_13
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13614..16769)
DNA (3156bp) protein (1052aa)
DEAD/DEAH box helicase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B74A82
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:ETO39584.1}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
L2_047_000M1_scaffold_394_14
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(16797..17831)
DNA (1035bp) protein (345aa)
RNA polymerase sigma factor n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VXP2_THESW
RNA polymerase sigma-32 subunit RpoH
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485).;"
L2_047_000M1_scaffold_394_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18102..18269
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3D7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98030.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_394_16
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18256..18609
DNA (354bp) protein (118aa)
Type III restriction enzyme, res subunit n=1 Tax=Desulfosporosinus sp. OT RepID=G2FSX3_9FIRM
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:EGW39274.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
L2_047_000M1_scaffold_394_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18558..20282
DNA (1725bp) protein (575aa)
DNA or RNA helicases of superfamily II n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3D8_9FIRM
DNA or RNA helicases of superfamily II {ECO:0000313|EMBL:CBK98031.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
DNA or RNA helicases of superfamily II
L2_047_000M1_scaffold_394_18
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20716..21543)
DNA (828bp) protein (276aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L2S4_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY67576.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L2_047_000M1_scaffold_394_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22150..22908
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0T5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99884.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_394_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22924..24129)
DNA (1206bp) protein (402aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0T6_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBK99885.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_394_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24965..26629
DNA (1665bp) protein (555aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:CBK99886.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CBK99886.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0T7_9FIRM
L2_047_000M1_scaffold_394_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26645..27208
DNA (564bp) protein (188aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:CBK99887.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CBK99887.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Acetolactate synthase, small subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0T8_9FIRM
L2_047_000M1_scaffold_394_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27354..28373
DNA (1020bp) protein (340aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ketol-acid reductoisomerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0T9_9FIRM
L2_047_000M1_scaffold_394_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28635..30293
DNA (1659bp) protein (553aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0U0_9FIRM
L2_047_000M1_scaffold_394_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30378..31004)
DNA (627bp) protein (209aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Uracil phosphoribosyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0U6_9FIRM
L2_047_000M1_scaffold_394_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31098..31544)
DNA (447bp) protein (149aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase {ECO:0000313|EMBL:CBK99894.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CBK99894.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Ribose-5-phosphate isomerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0U5_9FIRM
L2_047_000M1_scaffold_394_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31550..32287)
DNA (738bp) protein (246aa)
Inactive homolog of metal-dependent proteases, putative molecular chaperone n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0U4_9FIRM
Inactive homolog of metal-dependent proteases, putative molecular chaperone
Inactive homolog of metal-dependent proteases, putative molecular chaperone {ECO:0000313|EMBL:CBK99893.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_394_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32284..32709)
DNA (426bp) protein (142aa)
Conserved hypothetical nucleotide-binding protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0U3_9FIRM
conserved hypothetical nucleotide-binding protein
Conserved hypothetical nucleotide-binding protein {ECO:0000313|EMBL:CBK99892.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000M1_scaffold_394_29
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32802..34142)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q9G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27421.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_047_000M1_scaffold_394_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34344..35588
DNA (1245bp) protein (415aa)
Bacterial cell division membrane protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0U2_9FIRM
Bacterial cell division membrane protein
Bacterial cell division membrane protein {ECO:0000313|EMBL:CBK99891.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 48 in total

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