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L2_047_000M1_scaffold_412

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_412_1
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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768..2843
DNA (2076bp) protein (692aa)
Putative stage II sporulation protein E n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISI9_9CLOT
Putative stage II sporulation protein E {ECO:0000313|EMBL:CDB52220.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Stage II sporulation protein E (SpoIIE).
L2_047_000M1_scaffold_412_2
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2859..4643
DNA (1785bp) protein (595aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sp. CAG:678 RepID=R5L2Q4_9CLOT
glmS; glucosamine--fructose-6-phosphate aminotransferase
L2_047_000M1_scaffold_412_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4752..6278
DNA (1527bp) protein (509aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZ07_9CLOT
L2_047_000M1_scaffold_412_4
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6579..7721)
DNA (1143bp) protein (381aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IKX3_9CLOT
Signal transduction histidine kinase
L2_047_000M1_scaffold_412_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7718..8392)
DNA (675bp) protein (225aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Clostridium sp. CAG:217 RepID=R6JLV9_9CLOT
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDB50982.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_047_000M1_scaffold_412_6
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8516..8680
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32617.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_047_000M1_scaffold_412_7
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8673..9626
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB50981.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
4Fe-4S ferredoxin
L2_047_000M1_scaffold_412_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9632..10594
DNA (963bp) protein (321aa)
Redoxin family protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6INU3_9CLOT
Redoxin family protein {ECO:0000313|EMBL:CDB50980.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
AhpC/TSA family.
L2_047_000M1_scaffold_412_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11057..12055
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IX27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB50979.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_412_10
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12092..12643)
DNA (552bp) protein (184aa)
Shikimate kinase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NRA2_9CLOT
Shikimate kinase {ECO:0000313|EMBL:CDC10909.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
shikimate kinase
L2_047_000M1_scaffold_412_11
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12822..13148)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IKW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB50978.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_412_12
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13214..14137)
DNA (924bp) protein (308aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JLV4_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDB50977.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_412_13
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14251..14487)
DNA (237bp) protein (79aa)
Helix-turn-helix n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZY4_9CLOT
Helix-turn-helix {ECO:0000313|EMBL:CDB50976.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Helix-turn-helix.
L2_047_000M1_scaffold_412_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14619..15767
DNA (1149bp) protein (383aa)
Putative fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6INT8_9CLOT
Putative fibronectin type III domain protein {ECO:0000313|EMBL:CDB50975.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
IgA Peptidase M64./Fibronectin type III domain.
L2_047_000M1_scaffold_412_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15921..16808
DNA (888bp) protein (296aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IX22_9CLOT
glucose-1-phosphate thymidylyltransferase
L2_047_000M1_scaffold_412_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16818..17846
DNA (1029bp) protein (343aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IKW1_9CLOT
L2_047_000M1_scaffold_412_17
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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17847..18701
DNA (855bp) protein (285aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EFV02807.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EFV02807.1};; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
rfbD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MDK7_9FIRM
L2_047_000M1_scaffold_412_18
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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18698..19243
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=5 Tax=Lactobacillus johnsonii RepID=Q74JQ7_LACJO
dTDP-4-dehydrorhamnose 3,5-epimerase
Sugar biosynthesis protein {ECO:0000313|EMBL:ABM21421.1}; TaxID=33959 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii.;"
L2_047_000M1_scaffold_412_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19243..19668
DNA (426bp) protein (142aa)
GNAT family acetyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZQ5_9CLOT
GNAT family acetyltransferase {ECO:0000313|EMBL:CDB51934.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Predicted acyltransferase
L2_047_000M1_scaffold_412_20
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19718..21025
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51935.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
alpha-galactosidase
L2_047_000M1_scaffold_412_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21077..22684)
DNA (1608bp) protein (536aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:217 RepID=R6JP94_9CLOT
ABC transporter related {ECO:0000313|EMBL:CDB51937.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ABC transporter
L2_047_000M1_scaffold_412_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22792..23325)
DNA (534bp) protein (178aa)
Acetyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6INM1_9CLOT
Acetyltransferase {ECO:0000313|EMBL:CDB51938.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_412_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23484..24140
DNA (657bp) protein (219aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZQ9_9CLOT
L2_047_000M1_scaffold_412_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24147..25208
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51940.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_412_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25213..26034
DNA (822bp) protein (274aa)
Putative lipoprotein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2J3_9CLOT
Putative lipoprotein {ECO:0000313|EMBL:CDB51941.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_412_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26090..27460
DNA (1371bp) protein (457aa)
Magnesium transporter n=1 Tax=Clostridium sp. CAG:217 RepID=R6JPA0_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
mgtE; magnesium transporter
L2_047_000M1_scaffold_412_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27641..28168)
DNA (528bp) protein (176aa)
Nudix hydrolase 3 n=1 Tax=Clostridium sp. CAG:217 RepID=R6INM7_9CLOT
Nudix hydrolase 3 {ECO:0000313|EMBL:CDB51943.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ADP-ribose pyrophosphatase
L2_047_000M1_scaffold_412_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28170..28361)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IZR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51944.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_412_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28363..28758)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IRQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51945.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_412_30
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28771..30147)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J2K0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51946.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Endopolygalacturonase
Displaying items 1-30 of 71 in total

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