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L2_047_000M1_scaffold_425

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_425_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

L2_047_000M1_scaffold_425_2
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(75..893)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IJP9_9BACE
sodium:proton antiporter
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:EFV28179.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
L2_047_000M1_scaffold_425_3
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(907..1890)
DNA (984bp) protein (328aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
6-phosphofructokinase n=3 Tax=Bacteroides RepID=C3R2R8_9BACE
6-phosphofructokinase
L2_047_000M1_scaffold_425_4
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1914..2414)
DNA (501bp) protein (167aa)
Sigma-70 region 2 n=4 Tax=Bacteroides RepID=C3R2R9_9BACE
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EFI37830.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
RNA polymerase sigma 70
L2_047_000M1_scaffold_425_5
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2538..2966)
DNA (429bp) protein (143aa)
Hsp20/alpha crystallin family protein n=3 Tax=Bacteroides RepID=C3R2S0_9BACE
Small heat shock protein {ECO:0000313|EMBL:EFI12307.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
heat-shock protein
L2_047_000M1_scaffold_425_6
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3086..4147)
DNA (1062bp) protein (354aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Deoxyribose-phosphate aldolase n=4 Tax=Bacteroides RepID=C3R2S2_9BACE
Fructose-bisphosphate aldolase class I {ECO:0000313|EMBL:EFI37833.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L2_047_000M1_scaffold_425_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4164..4643)
DNA (480bp) protein (160aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
Ferritin A n=2 Tax=Bacteroides vulgatus RepID=A6L627_BACV8
ferritin
L2_047_000M1_scaffold_425_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4840..5292)
DNA (453bp) protein (151aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9SXU3_BACOV
ferritin
L2_047_000M1_scaffold_425_9
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5419..5616)
DNA (198bp) protein (66aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3R2S5_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI12312.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L2_047_000M1_scaffold_425_10
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5671..5934
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMA5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK64218.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_047_000M1_scaffold_425_11
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6723..6869
DNA (147bp) protein (49aa)
SNF2-related protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R2W8_BACSH
SNF2-like protein
SNF2-related protein {ECO:0000313|EMBL:ADY36524.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
L2_047_000M1_scaffold_425_12
Bacteroides sp. CAG:702, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6929..7327
DNA (399bp) protein (133aa)
SNF2-related protein n=1 Tax=Bacteroides sp. CAG:702 RepID=R5U075_9BACE
SNF2-related protein {ECO:0000313|EMBL:CCZ71460.1}; TaxID=1262747 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:702.;"
SNF2-like protein
L2_047_000M1_scaffold_425_13
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7393..8343
DNA (951bp) protein (317aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Methylenetetrahydrofolate reductase n=2 Tax=Parabacteroides RepID=K5ZYK0_9PORP
5,10-methylenetetrahydrofolate reductase
L2_047_000M1_scaffold_425_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8428..9471)
DNA (1044bp) protein (348aa)
L-asparaginase, type I {ECO:0000313|EMBL:EEC96554.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EEC96554.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L-asparaginase, type I n=3 Tax=Parabacteroides RepID=B7BAJ8_9PORP
L-asparaginase I
L2_047_000M1_scaffold_425_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9703..9885
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YKV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14412.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_047_000M1_scaffold_425_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9949..11073
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZBC7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08495.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
DNA polymerase III subunit delta
L2_047_000M1_scaffold_425_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11089..12351)
DNA (1263bp) protein (421aa)
MATE efflux family protein n=2 Tax=Parabacteroides johnsonii RepID=B7BAJ5_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EKN08494.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
multidrug efflux pump BexA
L2_047_000M1_scaffold_425_18
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12537..13535
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DAD6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77175.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_425_19
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13627..15243)
DNA (1617bp) protein (539aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DEG8_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX77174.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
putative ATP-binding ABC transporter protein
L2_047_000M1_scaffold_425_20
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15641..15892
DNA (252bp) protein (84aa)
Transglycosylase associated protein n=2 Tax=Parabacteroides RepID=B7BAJ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77922.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_425_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15962..18892)
DNA (2931bp) protein (977aa)
lacZ; beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZBC0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08490.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_047_000M1_scaffold_425_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18937..19515)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YZ62_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08489.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_425_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19523..20890)
DNA (1368bp) protein (456aa)
Iron-sulfur cluster-binding protein n=2 Tax=Parabacteroides johnsonii RepID=K5ZYJ0_9PORP
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EKN08488.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
electron transport protein
L2_047_000M1_scaffold_425_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20887..21627)
DNA (741bp) protein (247aa)
Cysteine-rich domain protein n=3 Tax=Parabacteroides RepID=B7BAI5_9PORP
Cysteine-rich domain protein {ECO:0000313|EMBL:EEC96564.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
oxidoreductase glycolate oxidase
L2_047_000M1_scaffold_425_25
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21700..24930)
DNA (3231bp) protein (1077aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DME4_9PORP
carbamyl phosphate synthetase
L2_047_000M1_scaffold_425_26
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24980..26152)
DNA (1173bp) protein (391aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BAI3_9PORP
L2_047_000M1_scaffold_425_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26159..28057)
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YZ57_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08484.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
amidophosphoribosyltransferase
L2_047_000M1_scaffold_425_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28680..30224
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZYI5_9PORP
two-component system sensor histidine kinase
L2_047_000M1_scaffold_425_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30570..35093
DNA (4524bp) protein (1508aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Y5Q1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08482.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glutamate synthase, large subunit
L2_047_000M1_scaffold_425_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35171..36598
DNA (1428bp) protein (476aa)
Glutamate synthase, NADH/NADPH, small subunit n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZAS0_9PORP
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:EKN08481.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glutamate synthase, small subunit
Displaying items 1-30 of 62 in total

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