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L2_047_000M1_scaffold_448

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_448_1
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

233..1636
DNA (1404bp) protein (468aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:62 RepID=R7C731_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDD73567.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
tRNA (uracil-5-) -methyltransferase
L2_047_000M1_scaffold_448_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1940..3295
DNA (1356bp) protein (452aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8A7_9CLOT
UDP-galactopyranose mutase {ECO:0000313|EMBL:CDD73563.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_448_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3286..4617)
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C727_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDD73562.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Na+-driven multidrug efflux pump
L2_047_000M1_scaffold_448_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4776..5411
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C630_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73561.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_448_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5408..6223)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73560.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_448_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6299..7129
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=root RepID=R7C5X8_9CLOT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
conserved hypothetical protein TIGR00726
L2_047_000M1_scaffold_448_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7134..7757
DNA (624bp) protein (208aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8A1_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD73558.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_448_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7748..8731
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C721_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73557.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L2_047_000M1_scaffold_448_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8728..8988)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C626_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73556.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_448_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9150..10160
DNA (1011bp) protein (337aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6F3_9CLOT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000313|EMBL:CDD73555.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
deoxyguanosinetriphosphate triphosphohydrolase-like protein
L2_047_000M1_scaffold_448_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10186..11949
DNA (1764bp) protein (588aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
DNA primase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5X2_9CLOT
DNA primase
L2_047_000M1_scaffold_448_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11986..13119
DNA (1134bp) protein (378aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:62 RepID=R7C895_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
RNA polymerase, sigma 70 subunit, RpoD
L2_047_000M1_scaffold_448_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13119..13823
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C717_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73552.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Predicted SAM-dependent methyltransferase
L2_047_000M1_scaffold_448_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13855..15504
DNA (1650bp) protein (550aa)
Phosphoribulokinase/uridine kinase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C622_9CLOT
Phosphoribulokinase/uridine kinase {ECO:0000313|EMBL:CDD73551.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
phosphoribulokinase/uridine kinase
L2_047_000M1_scaffold_448_15
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16042..17097
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5WFR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ91387.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
L2_047_000M1_scaffold_448_16
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17142..17639
DNA (498bp) protein (166aa)
Lipoprotein n=1 Tax=Bacillus nealsonii AAU1 RepID=R9C0T8_9BACI
Lipoprotein {ECO:0000313|EMBL:EOR22883.1}; TaxID=1202533 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus nealsonii AAU1.;"
Lipoprotein
L2_047_000M1_scaffold_448_17
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17695..18708
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VLM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ91385.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
L2_047_000M1_scaffold_448_18
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18773..19246)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6C9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73287.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_448_19
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19243..19536)
DNA (294bp) protein (98aa)
Positive regulator of late transcription n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7L8_9CLOT
Positive regulator of late transcription {ECO:0000313|EMBL:CDD73288.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Mor transcription activator family.
L2_047_000M1_scaffold_448_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19711..20544)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C599_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73289.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Protein kinase domain.
L2_047_000M1_scaffold_448_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20687..21877
DNA (1191bp) protein (397aa)
Major Facilitator Superfamily n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5S4_9CLOT
Major Facilitator Superfamily {ECO:0000313|EMBL:CDD73290.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Major Facilitator Superfamily.
L2_047_000M1_scaffold_448_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21854..22636)
DNA (783bp) protein (261aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5E0_9CLOT
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDD73291.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
putative methyl-accepting chemotaxis protein
L2_047_000M1_scaffold_448_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22794..23228
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73292.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
helix-turn-helix domain protein
L2_047_000M1_scaffold_448_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23243..25222
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7M2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73293.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Leucyl aminopeptidase (aminopeptidase T)
L2_047_000M1_scaffold_448_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25251..25763
DNA (513bp) protein (171aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5A4_9CLOT
L2_047_000M1_scaffold_448_26
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26000..26098
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73295.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L2_047_000M1_scaffold_448_27
unknown

Not on your lists

comp(26132..26308)
DNA (177bp) protein (59aa)

This feature has no annotations

L2_047_000M1_scaffold_448_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26308..27519)
DNA (1212bp) protein (404aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5E2_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDD73296.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L2_047_000M1_scaffold_448_29
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27699..29972
DNA (2274bp) protein (758aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3Z4_9CLOT
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
L2_047_000M1_scaffold_448_30
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30138..30971
DNA (834bp) protein (278aa)
Putative Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5A7_9CLOT
Putative Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:CDD73299.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Predicted phosphohydrolases
Displaying items 1-30 of 43 in total

View Taxonomy