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L2_047_000M1_scaffold_455

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_455_1
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..210)
DNA (210bp) protein (70aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
(P)ppGpp synthetase, RelA/SpoT family n=2 Tax=Alistipes IPR9_9BACT">RepID=D4IPR9_9BACT
(P)ppGpp synthetase RelA/SpoT family {ECO:0000313|EMBL:CCZ96904.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_455_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(214..1230)
DNA (1017bp) protein (339aa)
Protein RecA n=2 Tax=Alistipes IPR8_9BACT">RepID=D4IPR8_9BACT
RecA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_455_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1438..1899)
DNA (462bp) protein (154aa)
Peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:CBK64929.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CBK64929.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Peroxiredoxin n=2 Tax=Alistipes IPR7_9BACT">RepID=D4IPR7_9BACT
L2_047_000M1_scaffold_455_4
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1984..2196)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WM12_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ96901.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L2_047_000M1_scaffold_455_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2311..2835)
DNA (525bp) protein (175aa)
Mannose-6-phosphate isomerase n=2 Tax=Alistipes IPR5_9BACT">RepID=D4IPR5_9BACT
Mannose-6-phosphate isomerase
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:CCZ96900.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_455_6
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2876..3742)
DNA (867bp) protein (289aa)
Predicted transcriptional regulator n=1 Tax=Alistipes sp. CAG:53 RepID=R5W9Q1_9BACT
Predicted transcriptional regulator {ECO:0000313|EMBL:CCZ96899.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Predicted transcriptional regulator
L2_047_000M1_scaffold_455_7
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3781..4731)
DNA (951bp) protein (317aa)
Prolyl oligopeptidase family n=1 Tax=Alistipes sp. CAG:53 RepID=R5W187_9BACT
Prolyl oligopeptidase family {ECO:0000313|EMBL:CCZ96898.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Prolyl oligopeptidase family.
L2_047_000M1_scaffold_455_8
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4806..5867)
DNA (1062bp) protein (354aa)
Thiol-disulfide isomerase and thioredoxins n=1 Tax=Alistipes sp. CAG:53 RepID=R5WWP2_9BACT
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:CCZ96897.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Thiol-disulfide isomerase and thioredoxins
L2_047_000M1_scaffold_455_9
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5960..7372)
DNA (1413bp) protein (471aa)
chromosomal replication initiation protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289359E
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
chromosomal replication initiator protein DnaA
L2_047_000M1_scaffold_455_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7599..9341
DNA (1743bp) protein (581aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:CBK64924.1}; EC=5.4.2.8 {ECO:0000313|EMBL:CBK64924.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Phosphomannomutase n=2 Tax=Alistipes IPR2_9BACT">RepID=D4IPR2_9BACT
L2_047_000M1_scaffold_455_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9649..10032
DNA (384bp) protein (128aa)
Putative transcriptional regulator n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y035_9BACT
Putative transcriptional regulator {ECO:0000313|EMBL:CDD24629.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
putative antibiotic resistance-related regulatory protein
L2_047_000M1_scaffold_455_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10041..11303
DNA (1263bp) protein (421aa)
Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component n=1 Tax=Alistipes sp. CAG:53 RepID=R5W9P7_9BACT
Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component {ECO:0000313|EMBL:CCZ96894.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
L2_047_000M1_scaffold_455_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11456..11776)
DNA (321bp) protein (107aa)
Predicted pyrophosphatase n=2 Tax=Alistipes RepID=D4IPQ9_9BACT
Predicted pyrophosphatase
Predicted pyrophosphatase {ECO:0000313|EMBL:CBK64921.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_455_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11778..12425)
DNA (648bp) protein (216aa)
Predicted O-methyltransferase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPQ8_9BACT
Predicted O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CBK64920.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_455_15
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12426..13019)
DNA (594bp) protein (198aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Alistipes sp. CAG:53 RepID=R5WM02_9BACT
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:CCZ96891.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
L2_047_000M1_scaffold_455_16
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13021..14235)
DNA (1215bp) protein (405aa)
Predicted Zn-dependent peptidases n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPQ6_9BACT
Predicted Zn-dependent peptidases
Predicted Zn-dependent peptidases {ECO:0000313|EMBL:CBK64918.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_455_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14310..17117)
DNA (2808bp) protein (936aa)
Excinuclease ABC subunit A n=1 Tax=Alistipes sp. CAG:53 RepID=R5W9P1_9BACT
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Excinuclease ABC subunit A
L2_047_000M1_scaffold_455_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17498..18103)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5W177_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ96888.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L2_047_000M1_scaffold_455_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18106..19458)
DNA (1353bp) protein (451aa)
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042, ECO:0000313|EMBL:CBK64916.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Signal peptidase I, bacterial type n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPQ4_9BACT
L2_047_000M1_scaffold_455_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19500..20261)
DNA (762bp) protein (254aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPQ3_9BACT
L2_047_000M1_scaffold_455_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20376..21155
DNA (780bp) protein (260aa)
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:CBK64914.1};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
tRNA pseudouridine synthase A n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPQ2_9BACT
L2_047_000M1_scaffold_455_22
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21152..21340
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5W9N7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64913.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_455_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21419..22795)
DNA (1377bp) protein (459aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CBK63298.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IK36_9BACT
L2_047_000M1_scaffold_455_24
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22795..24489)
DNA (1695bp) protein (565aa)
Dipeptidase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IK35_9BACT
Dipeptidase
Dipeptidase {ECO:0000313|EMBL:CBK63297.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_455_25
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24717..25934
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IK34_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK63296.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_455_26
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26038..26715
DNA (678bp) protein (226aa)
Putative enzyme with a TIM-barrel fold n=1 Tax=Alistipes sp. CAG:53 RepID=R5WLZ1_9BACT
Putative enzyme with a TIM-barrel fold {ECO:0000313|EMBL:CCZ96876.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L2_047_000M1_scaffold_455_27
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26754..27536
DNA (783bp) protein (261aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Alistipes sp. CAG:53 RepID=R5W2K0_9BACT
L2_047_000M1_scaffold_455_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28941..30305)
DNA (1365bp) protein (455aa)
Sugar phosphate permease n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQH4_9BACT
Sugar phosphate permease
Sugar phosphate permease {ECO:0000313|EMBL:CBK65186.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_047_000M1_scaffold_455_29
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30310..31224)
DNA (915bp) protein (305aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase n=2 Tax=Alistipes RepID=D4IKA0_9BACT
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCZ96606.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L2_047_000M1_scaffold_455_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31310..33553)
DNA (2244bp) protein (748aa)
Glycoside hydrolase family 2 sugar binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD41_NIAKG
glycoside hydrolase family protein
Glycoside hydrolase family 2 sugar binding protein {ECO:0000313|EMBL:AEV98273.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 40 in total

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