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L2_047_000M1_scaffold_564

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_564_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..232)
DNA (231bp) protein (77aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDS74214.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDS74214.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3I0_9FIRM
L2_047_000M1_scaffold_564_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(607..1767)
DNA (1161bp) protein (387aa)
Stage V sporulation protein D n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUM5_9FIRM
Stage V sporulation protein D {ECO:0000313|EMBL:CCZ24717.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_564_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1764..2411)
DNA (648bp) protein (216aa)
Stage V sporulation protein D n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUM5_9FIRM
Stage V sporulation protein D {ECO:0000313|EMBL:CCZ24717.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
stage V sporulation protein D
L2_047_000M1_scaffold_564_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2456..4606)
DNA (2151bp) protein (717aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q833_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24718.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_564_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4606..4896)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24719.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_564_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4893..5828)
DNA (936bp) protein (312aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7J3_9FIRM
rsmH; ribosomal RNA small subunit methyltransferase H
L2_047_000M1_scaffold_564_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5839..6270)
DNA (432bp) protein (144aa)
Protein MraZ n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR81_9FIRM
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
mraZ; Cell division protein
L2_047_000M1_scaffold_564_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(6467..6634)
DNA (168bp) protein (56aa)
50S ribosomal protein L32 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUM9_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
rpmF; 50S ribosomal protein L32
L2_047_000M1_scaffold_564_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6647..7147)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q835_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24723.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_564_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7290..7532)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24724.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_564_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7585..8889)
DNA (1305bp) protein (435aa)
GTPase Der n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7J9_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
der; GTPase Der
L2_047_000M1_scaffold_564_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8891..9559)
DNA (669bp) protein (223aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Cytidylate kinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR84_9FIRM
cytidylate kinase
L2_047_000M1_scaffold_564_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9600..10379)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24727.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_564_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10417..11076)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q840_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24728.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_564_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11315..11770)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24729.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Pyridoxamine 5'-phosphate oxidase.
L2_047_000M1_scaffold_564_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11782..12423)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7K3_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted membrane protein
L2_047_000M1_scaffold_564_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12660..13436)
DNA (777bp) protein (259aa)
HAD-superfamily hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR88_9FIRM
HAD-superfamily hydrolase {ECO:0000313|EMBL:CCZ24731.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
haloacid dehalogenase-like hydrolase
L2_047_000M1_scaffold_564_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13438..14205)
DNA (768bp) protein (256aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
murI; putative glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUN7_9FIRM
L2_047_000M1_scaffold_564_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14267..15502)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q845_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24733.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
serine protease
L2_047_000M1_scaffold_564_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15518..16771)
DNA (1254bp) protein (418aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEG3_9FIRM
PAS/PAC sensor signal transduction histidine kinase
L2_047_000M1_scaffold_564_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16761..17447)
DNA (687bp) protein (229aa)
Response regulator receiver domain protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7K9_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ24735.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
phoP; two-component system response regulator
L2_047_000M1_scaffold_564_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17431..18384)
DNA (954bp) protein (318aa)
PhoH family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR92_9FIRM
PhoH family protein {ECO:0000313|EMBL:CCZ24736.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
phoH; phosphate starvation-induced protein PhoH
L2_047_000M1_scaffold_564_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18381..19286)
DNA (906bp) protein (302aa)
Sporulation protein YqfD n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUP1_9FIRM
Sporulation protein YqfD {ECO:0000313|EMBL:CCZ24737.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
stage IV sporulation protein
L2_047_000M1_scaffold_564_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19283..19474)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q849_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24738.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_564_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19539..20006)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24739.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
marR; MarR family transcriptional regulator
L2_047_000M1_scaffold_564_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20019..20885)
DNA (867bp) protein (289aa)
DegV family EDD domain-containing protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7L3_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:CCZ24740.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
degV.1; DegV family protein
L2_047_000M1_scaffold_564_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20973..21572
DNA (600bp) protein (200aa)
Putative YigZ family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR95_9FIRM
Putative YigZ family protein {ECO:0000313|EMBL:CCZ24741.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_564_28
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21632..23326)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90194.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_047_000M1_scaffold_564_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23393..26821)
DNA (3429bp) protein (1143aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Transcription-repair-coupling factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7L9_9FIRM
mfd; transcription-repair coupling factor
L2_047_000M1_scaffold_564_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26830..27384)
DNA (555bp) protein (185aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Peptidyl-tRNA hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR98_9FIRM
peptidyl-tRNA hydrolase
Displaying items 1-30 of 51 in total

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