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L2_047_000M1_scaffold_593

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_593_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(100..885)
DNA (786bp) protein (262aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
MazG family protein n=3 Tax=Parabacteroides RepID=B7BE36_9PORP
MazG family protein {ECO:0000313|EMBL:EEC95317.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L2_047_000M1_scaffold_593_2
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1083..3176)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DL24_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76631.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
thiol:disulfide interchange protein
L2_047_000M1_scaffold_593_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3184..4185)
DNA (1002bp) protein (334aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Pseudouridine synthase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZZG1_9PORP
RNA pseudouridylate synthase
L2_047_000M1_scaffold_593_4
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4352..4981
DNA (630bp) protein (210aa)
DNA-binding protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IMB8_9PORP
DNA-binding protein {ECO:0000313|EMBL:CDB50450.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L2_047_000M1_scaffold_593_5
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5260..5802
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=R5D8W1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76633.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
putative RNA polymerase sigma factor
L2_047_000M1_scaffold_593_6
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5876..6841
DNA (966bp) protein (322aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides RepID=B7BE29_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76634.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
putative anti-sigma factor
L2_047_000M1_scaffold_593_7
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7252..10575
DNA (3324bp) protein (1108aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides RepID=B7BE28_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76636.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
putative outer membrane protein probably involved in nutrient binding
L2_047_000M1_scaffold_593_8
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10588..12195
DNA (1608bp) protein (536aa)
SusD family protein n=2 Tax=Parabacteroides RepID=B7BE27_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76637.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_593_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12298..14733
DNA (2436bp) protein (812aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BE26_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95307.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
six-hairpin glycosidase
L2_047_000M1_scaffold_593_10
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14800..17457
DNA (2658bp) protein (886aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=2 Tax=Parabacteroides RepID=B7BE25_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76639.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
beta-galactosidase
L2_047_000M1_scaffold_593_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17587..20214
DNA (2628bp) protein (876aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z009_9PORP
L2_047_000M1_scaffold_593_12
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20356..21207
DNA (852bp) protein (284aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=B7BE23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76641.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_593_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21298..22329
DNA (1032bp) protein (344aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BE22_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08786.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_593_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22398..22859
DNA (462bp) protein (154aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BE21_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95302.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_593_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23063..23191
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZZG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08788.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Site-specific recombinase XerD
L2_047_000M1_scaffold_593_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23405..25621)
DNA (2217bp) protein (739aa)
RelA/SpoT family protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z011_9PORP
RelA/SpoT family protein {ECO:0000313|EMBL:EKN08789.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
GTP pyrophosphokinase
L2_047_000M1_scaffold_593_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25797..27317
DNA (1521bp) protein (507aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BDQ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95439.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_593_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27352..28050)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BDQ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95438.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
cutF; lipoprotein
L2_047_000M1_scaffold_593_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28159..29208)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y6L1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08792.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_593_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(29443..29790)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=4 Tax=Parabacteroides RepID=B7BDQ3_9PORP
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rplS; 50S ribosomal protein L19
L2_047_000M1_scaffold_593_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29937..30722)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5Z015_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08794.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_047_000M1_scaffold_593_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30741..31514)
DNA (774bp) protein (258aa)
Tat pathway signal sequence domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BDQ0_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEC95448.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
NIPSNAP family containing protein
L2_047_000M1_scaffold_593_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31692..34676
DNA (2985bp) protein (995aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZBP9_9PORP
glycoside hydrolase family protein
L2_047_000M1_scaffold_593_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34719..35747
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y6L5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08797.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L-threonine-O-3-phosphate decarboxylase
L2_047_000M1_scaffold_593_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36225..37493
DNA (1269bp) protein (423aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZZH5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08798.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_593_26
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37490..38254
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z018_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08799.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_593_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38283..40076)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZC98_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08800.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
DNA mismatch repair protein MutS
L2_047_000M1_scaffold_593_28
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40231..41091
DNA (861bp) protein (287aa)
Phospholipase A1 n=3 Tax=Parabacteroides RepID=B7BDN7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76380.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
outer membrane phospholipase A
L2_047_000M1_scaffold_593_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41165..42175
DNA (1011bp) protein (337aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BDN6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08802.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transmembrane protein
L2_047_000M1_scaffold_593_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42209..43069
DNA (861bp) protein (287aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Methionine aminopeptidase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZZH9_9PORP
methionine aminopeptidase A
Displaying items 1-30 of 35 in total

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