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L2_047_000M1_scaffold_605

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_605_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..185)
DNA (183bp) protein (61aa)
Transglutaminase-like protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DKL4_BIFBI
Transglutaminase-like protein {ECO:0000313|EMBL:ERI82072.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ97621.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
putative cysteine protease
L2_047_000M1_scaffold_605_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(182..1510)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HAC8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50991.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_047_000M1_scaffold_605_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1521..3227)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GH44_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23750.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_047_000M1_scaffold_605_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3292..9270)
DNA (5979bp) protein (1993aa)
Fibronectin type III domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CC14_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97624.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_047_000M1_scaffold_605_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9349..10767)
DNA (1419bp) protein (473aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:KFI42506.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI42506.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
serine/threonine protein kinase (EC:2.7.11.1)
Kinase domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DQS6_BIFBI
L2_047_000M1_scaffold_605_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11010..15293
DNA (4284bp) protein (1428aa)
ATP-dependent DNA helicase UvrD n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976629
DNA helicase {ECO:0000313|EMBL:KFI42507.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ATP-dependent DNA helicase, UvrD/REP family
L2_047_000M1_scaffold_605_7
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15290..19495
DNA (4206bp) protein (1402aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
ATP-dependent DNA helicase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GR44_9BIFI
pcrA; ATP-dependent DNA helicase
L2_047_000M1_scaffold_605_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19632..20498
DNA (867bp) protein (289aa)
GNAT family acetyltransferase n=2 Tax=Bifidobacterium bifidum RepID=K2HX08_BIFBI
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:EKE50997.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_047_000M1_scaffold_605_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20495..21877
DNA (1383bp) protein (461aa)
Major facilitator superfamily MFS 1 domain containing protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HU12_BIFBI
Major facilitator superfamily MFS 1 domain containing protein {ECO:0000313|EMBL:EKE50998.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
major facilitator superfamily MFS 1 domain
L2_047_000M1_scaffold_605_10
unknown

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21890..22207
DNA (318bp) protein (106aa)

This feature has no annotations

L2_047_000M1_scaffold_605_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22320..22499)
DNA (180bp) protein (60aa)
DNA-damage-inducible protein J n=8 Tax=Bifidobacterium RepID=I3WGJ2_BIFBI
hypothetical protein
DNA-damage-inducible protein J {ECO:0000313|EMBL:EKF16209.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_047_000M1_scaffold_605_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22552..22761)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HAD7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97632.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
transposase
L2_047_000M1_scaffold_605_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23126..23878
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=3 Tax=Bifidobacterium bifidum RepID=E4V856_BIFBI
L2_047_000M1_scaffold_605_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24042..24932
DNA (891bp) protein (297aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
4-hydroxy-tetrahydrodipicolinate synthase n=5 Tax=Bifidobacterium RepID=I3WGJ5_BIFBI
L2_047_000M1_scaffold_605_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25106..26947
DNA (1842bp) protein (614aa)
Metal-dependent hydrolase n=7 Tax=Bifidobacterium bifidum RepID=E4NZX4_BIFBP
ribonuclease J
Metal-dependent hydrolase {ECO:0000313|EMBL:KFI42515.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_047_000M1_scaffold_605_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27113..29725
DNA (2613bp) protein (871aa)
Membrane alanine aminopeptidase n=5 Tax=Bifidobacterium bifidum RepID=E3ELX1_BIFBS
pepN; Membrane alanine aminopeptidase
Aminopeptidase N {ECO:0000313|EMBL:EKE51005.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_047_000M1_scaffold_605_17
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30263..31927
DNA (1665bp) protein (555aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GE08_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23693.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L2_047_000M1_scaffold_605_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32207..33688
DNA (1482bp) protein (494aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Phosphoglucosamine mutase n=8 Tax=Bifidobacterium RepID=E3ELX4_BIFBS
L2_047_000M1_scaffold_605_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33730..34383
DNA (654bp) protein (218aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Peptide deformylase n=2 Tax=Bifidobacterium RepID=K2M0I9_BIFBI
peptide deformylase
L2_047_000M1_scaffold_605_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34725..34970)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P057_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF15490.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Displaying 20 items

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