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L2_047_000M1_scaffold_616

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_616_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..80)
DNA (78bp) protein (26aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
DNA gyrase subunit A n=3 Tax=Parabacteroides RepID=K5Z5Q2_9PORP
DNA gyrase subunit A
L2_047_000M1_scaffold_616_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

385..3039
DNA (2655bp) protein (885aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z8W6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07796.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
negative regulator of genetic competence
L2_047_000M1_scaffold_616_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3154..4068
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z9H8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07795.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_616_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4077..5459
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YXC2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07794.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
ABC transporter
L2_047_000M1_scaffold_616_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5456..6964)
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides RepID=B7B8N3_9PORP
two-component system sensor histidine kinase
L2_047_000M1_scaffold_616_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7123..9249
DNA (2127bp) protein (709aa)
Tex-like protein N-terminal domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B8N2_9PORP
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EEC97206.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
RNA-binding protein
L2_047_000M1_scaffold_616_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9273..9758
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=Parabacteroides RepID=K5Z8W3_9PORP
transcriptional regulator
L2_047_000M1_scaffold_616_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9901..10302)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5Z9H6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07790.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_616_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10405..11517
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YXB9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07789.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glycoside hydrolase family protein
L2_047_000M1_scaffold_616_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11600..12727)
DNA (1128bp) protein (376aa)
imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis hisB n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZWK5_9PORP
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_047_000M1_scaffold_616_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12813..13844)
DNA (1032bp) protein (344aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Histidinol-phosphate aminotransferase n=2 Tax=Parabacteroides johnsonii RepID=B7B8M7_9PORP
histidinol-phosphate aminotransferase
L2_047_000M1_scaffold_616_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13841..15130)
DNA (1290bp) protein (430aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Histidinol dehydrogenase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B8M6_9PORP
hisD; histidinol dehydrogenase
L2_047_000M1_scaffold_616_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15154..16005)
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z9H1_9PORP
L2_047_000M1_scaffold_616_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16258..16575)
DNA (318bp) protein (106aa)
Multidrug resistance protein, SMR family n=3 Tax=Parabacteroides RepID=B7B8M3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77117.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
multidrug resistance protein
L2_047_000M1_scaffold_616_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16604..19156)
DNA (2553bp) protein (851aa)
Peptidase family M1 n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B8M2_9PORP
Peptidase family M1 {ECO:0000313|EMBL:EEC97215.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
aminopeptidase
L2_047_000M1_scaffold_616_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19180..19635)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y3X0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07782.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_616_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19651..22539)
DNA (2889bp) protein (963aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z8V7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07781.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
M16 family peptidase
L2_047_000M1_scaffold_616_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22653..23822
DNA (1170bp) protein (390aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=2 Tax=Parabacteroides RepID=B7B8L8_9PORP
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EEC97224.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_616_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24097..25362
DNA (1266bp) protein (422aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5YXB3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07779.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
membrane transport protein
L2_047_000M1_scaffold_616_20
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25461..25679)
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B8L5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76359.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_047_000M1_scaffold_616_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25952..26125)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y3W8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07777.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_047_000M1_scaffold_616_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26166..26939
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z8V3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07776.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
methyltransferase type 11
L2_047_000M1_scaffold_616_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26958..27215)
DNA (258bp) protein (86aa)
Uncharacterized protein (Fragment) n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B721_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC97765.1}; Flags: Fragment;; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L2_047_000M1_scaffold_616_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(27566..29320)
DNA (1755bp) protein (585aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IXB0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06808.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_047_000M1_scaffold_616_25
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29824..30942)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9EFL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY40486.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
ribose phosphate pyrophosphokinase
L2_047_000M1_scaffold_616_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30964..31461)
DNA (498bp) protein (166aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Bacteroides RepID=A7LWX9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM96660.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
phosphatase
L2_047_000M1_scaffold_616_27
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31465..32442)
DNA (978bp) protein (326aa)
Putative DNA protecting protein DprA n=3 Tax=Bacteroides RepID=A7LWY1_BACOV
Putative DNA protecting protein DprA {ECO:0000313|EMBL:EEX45616.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
DNA processing protein DprA
L2_047_000M1_scaffold_616_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32688..33896)
DNA (1209bp) protein (403aa)
Site-specific recombinase, phage integrase family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVS1_9BACT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS04124.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
transposase
L2_047_000M1_scaffold_616_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33898..34542)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M3I1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO08814.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
Displaying 29 items

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