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L2_047_000M1_scaffold_624

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_624_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..3043
DNA (3042bp) protein (1014aa)
Helicase C-terminal domain protein (Fragment) n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHU1_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEU98617.1}; Flags: Fragment;; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
helicase
L2_047_000M1_scaffold_624_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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3056..3670
DNA (615bp) protein (205aa)
Sortase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKE6_9CLOT
Sortase family protein {ECO:0000313|EMBL:EEA83505.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
LPXTG-site transpeptidase (sortase) family protein
L2_047_000M1_scaffold_624_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3663..4049
DNA (387bp) protein (129aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=D4RZV9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93637.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_624_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4068..4757
DNA (690bp) protein (230aa)
Uncharacterized protein, involved in the regulation of septum location n=4 Tax=Clostridiales RepID=D4JJ39_9FIRM
Uncharacterized protein, involved in the regulation of septum location
Uncharacterized protein, involved in the regulation of septum location {ECO:0000313|EMBL:CBK93636.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_047_000M1_scaffold_624_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4812..5723
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0Z2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13282.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_624_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6134..6496
DNA (363bp) protein (121aa)
Type IV secretory pathway, VirD4 components n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXV7_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL12197.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_624_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6496..6777
DNA (282bp) protein (94aa)
TraG/TraD family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRA3_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EEG94843.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Type IV secretory pathway, VirD4 components
L2_047_000M1_scaffold_624_8
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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7711..7908
DNA (198bp) protein (66aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VKD0_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:EKY23973.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_000M1_scaffold_624_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8198..8578
DNA (381bp) protein (127aa)
Transposase, IS4 family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNV6_CLOSY
Transposase, IS4 family {ECO:0000313|EMBL:ERI79216.1}; Flags: Fragment;; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
transposase IS4 family protein
L2_047_000M1_scaffold_624_10
Veillonella sp. oral taxon 780, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9141..9857
DNA (717bp) protein (239aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=944564 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 780 str. F0422.;"
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Veillonella sp. oral taxon 780 str. F0422 RepID=F9N4S7_9FIRM
S-adenosylmethionine decarboxylase
L2_047_000M1_scaffold_624_11
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

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9857..10333
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5J379_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY47024.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
L2_047_000M1_scaffold_624_12
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

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10311..11135
DNA (825bp) protein (275aa)
Methyltransferase type 12 n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IYB9_9FIRM
Methyltransferase type 12 {ECO:0000313|EMBL:CCY47025.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
L2_047_000M1_scaffold_624_13
Listeria monocytogenes, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11119..12180
DNA (1062bp) protein (354aa)
Uncharacterized protein n=2 Tax=Listeria monocytogenes RepID=J7NN84_LISMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH93721.1}; TaxID=1030009 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria monocytogenes serotype 4a (strain M7).;"
L2_047_000M1_scaffold_624_14
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

12177..13268
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IYC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY47030.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
L2_047_000M1_scaffold_624_15
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

13274..14380
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JDJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY47026.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
hypothetical protein
L2_047_000M1_scaffold_624_16
unknown

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14361..15089
DNA (729bp) protein (243aa)

This feature has no annotations

L2_047_000M1_scaffold_624_17
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

15105..15803
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IXL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY47028.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
L2_047_000M1_scaffold_624_18
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15941..16933
DNA (993bp) protein (331aa)
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=684738 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. lactis (strain KF147).;"
Pyruvate kinase n=1 Tax=Lactococcus lactis subsp. lactis (strain KF147) RepID=A9QS79_LACLK
L2_047_000M1_scaffold_624_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17262..17561
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Clostridium clostridioforme RepID=N9YI31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67864.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
transposase IS66
L2_047_000M1_scaffold_624_20
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18536..19603
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ANH9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58714.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L2_047_000M1_scaffold_624_21
unknown

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19640..19957
DNA (318bp) protein (106aa)

This feature has no annotations

L2_047_000M1_scaffold_624_22
unknown

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19978..20832
DNA (855bp) protein (285aa)

This feature has no annotations

L2_047_000M1_scaffold_624_23
Bacillus sp. L_1B0_8, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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20816..21052
DNA (237bp) protein (79aa)
Acyl carrier protein n=1 Tax=Bacillus cereus HuB1-1 RepID=J8XZZ2_BACCE
Contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ80000.1}; TaxID=1588630 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. L_1B0_8.;"
hypothetical protein
L2_047_000M1_scaffold_624_24
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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21058..22503
DNA (1446bp) protein (482aa)
AMP-dependent synthetase and ligase family protein id=1296819 bin=GWE1_Spirochaete_60_18 species=Lactococcus lactis genus=Lactococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
AMP-dependent synthetase
AMP-dependent synthetase and ligase family protein {ECO:0000313|EMBL:ADA64976.1}; TaxID=684738 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. lactis (strain KF147).;"
L2_047_000M1_scaffold_624_25
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22543..23052
DNA (510bp) protein (170aa)
UPI0003D1B6D3 related cluster n=1 Tax=unknown RepID=UPI0003D1B6D3
Nitroreductase {ECO:0000313|EMBL:ETA69080.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
nitroreductase
L2_047_000M1_scaffold_624_26
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23101..24669
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2J8Y9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY67895.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L2_047_000M1_scaffold_624_27
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24694..25380
DNA (687bp) protein (229aa)
Thioesterase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I7C8_CLOCE
thioesterase
Thioesterase {ECO:0000313|EMBL:ACL75052.1}; Flags: Precursor;; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L2_047_000M1_scaffold_624_28
unknown

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25382..25606
DNA (225bp) protein (75aa)

This feature has no annotations

L2_047_000M1_scaffold_624_29
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25685..26611)
DNA (927bp) protein (309aa)
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K224_CLOPA
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:AGK97147.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_047_000M1_scaffold_624_30
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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26778..28514
DNA (1737bp) protein (579aa)
Putative ABC-transporter TycD n=1 Tax=Brevibacillus brevis RepID=O30410_BREBE
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:EJL27882.1}; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
tycD; ABC transporter ATP-binding protein/permease
Displaying items 1-30 of 40 in total

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