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L2_047_000M1_scaffold_629

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_629_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..829
DNA (828bp) protein (276aa)
Phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K919_9FIRM
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
Phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CBL01332.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_629_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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847..1614
DNA (768bp) protein (256aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9F1_9FIRM
L2_047_000M1_scaffold_629_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1634..2302
DNA (669bp) protein (223aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K921_9FIRM
phosphate transport system regulatory protein PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_629_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2567..2965
DNA (399bp) protein (133aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K922_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CBL01335.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_629_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3133..3639
DNA (507bp) protein (169aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9F5_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDP22231.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_047_000M1_scaffold_629_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3945..4865
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9F7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22233.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
dTDP-glucose pyrophosphorylase
L2_047_000M1_scaffold_629_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4959..5399)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22234.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_047_000M1_scaffold_629_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5461..6267)
DNA (807bp) protein (269aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9G0_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDP22235.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_629_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6403..7980)
DNA (1578bp) protein (526aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:CBL01340.1}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:CBL01340.1};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K927_9FIRM
L2_047_000M1_scaffold_629_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8413..9603
DNA (1191bp) protein (397aa)
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K928_9FIRM
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EDP22238.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_629_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9600..10367
DNA (768bp) protein (256aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057, ECO:0000313|EMBL:CBL01342.1};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K929_9FIRM
L2_047_000M1_scaffold_629_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10360..10539
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S9G6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01343.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_629_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10555..11640
DNA (1086bp) protein (362aa)
Predicted membrane protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K931_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL01344.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_629_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11828..14494
DNA (2667bp) protein (889aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9G8_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDP22242.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_629_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15020..15763
DNA (744bp) protein (248aa)
Putative azaleucine resistance protein AzlC n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9H1_9FIRM
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:EDP22244.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L2_047_000M1_scaffold_629_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15760..16089
DNA (330bp) protein (110aa)
Branched-chain amino acid transport protein AzlD n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9H2_9FIRM
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:EDP22245.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
AzlD; putative branched-chain amino acid permease
L2_047_000M1_scaffold_629_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16099..17106)
DNA (1008bp) protein (336aa)
asparaginase (EC:3.5.1.1)
Asparaginase {ECO:0000313|EMBL:CBL01346.1}; EC=3.5.1.1 {ECO:0000313|EMBL:CBL01346.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Asparaginase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K933_9FIRM
L2_047_000M1_scaffold_629_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17275..18132
DNA (858bp) protein (286aa)
Thioredoxin reductase (EC:1.8.1.9)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9H4_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDP22247.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_629_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18129..18824
DNA (696bp) protein (232aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9H6_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDP22248.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_047_000M1_scaffold_629_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18882..19865)
DNA (984bp) protein (328aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K935_9FIRM
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) {ECO:0000313|EMBL:CBL01348.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_629_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20001..21605)
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=2 Tax=Faecalibacterium prausnitzii RepID=D4K936_9FIRM
bacterial peptide chain release factor 3 (bRF-3)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_629_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21730..22596)
DNA (867bp) protein (289aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9H9_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDP22251.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L2_047_000M1_scaffold_629_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22800..24182
DNA (1383bp) protein (461aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain (EC:1.3.1.74 3.4.21.-)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBL01351.1}; EC=1.3.1.74 {ECO:0000313|EMBL:CBL01351.1};; EC=3.4.21.- {ECO:0000313|EMBL:CBL01351.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K938_9FIRM
L2_047_000M1_scaffold_629_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24504..26459)
DNA (1956bp) protein (652aa)
Pullulanase, type I {ECO:0000313|EMBL:EDP22257.1}; EC=3.2.1.41 {ECO:0000313|EMBL:EDP22257.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
pullulanase, type I (EC:3.2.1.41)
Pullulanase, type I n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9I5_9FIRM
L2_047_000M1_scaffold_629_25
unknown

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comp(26419..26733)
DNA (315bp) protein (105aa)

This feature has no annotations

L2_047_000M1_scaffold_629_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26741..28498)
DNA (1758bp) protein (586aa)
Transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K940_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDP22258.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Transcriptional regulator
L2_047_000M1_scaffold_629_27
unknown

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28579..29058
DNA (480bp) protein (160aa)

This feature has no annotations

L2_047_000M1_scaffold_629_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28869..29597)
DNA (729bp) protein (243aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S679_9FIRM
L2_047_000M1_scaffold_629_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29799..30335)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K941_9FIRM
Protein of unknown function (DUF1393).
Uncharacterized protein {ECO:0000313|EMBL:CBL01354.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_629_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30746..31597
DNA (852bp) protein (284aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase subunit A {ECO:0000313|EMBL:CBL01355.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CBL01355.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Transketolase subunit A n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K942_9FIRM
Displaying items 1-30 of 32 in total

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