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L2_047_000M1_scaffold_637

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_637_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..444
DNA (444bp) protein (148aa)
Maltodextrin transport system permease malC n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T010_ROSHA
maltodextrin transport system permease malC
Maltodextrin transport system permease malC {ECO:0000313|EMBL:AEN95654.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_047_000M1_scaffold_637_2
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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441..1280
DNA (840bp) protein (280aa)
Maltose/maltodextrin transport system permease n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T011_ROSHA
maltose/maltodextrin transport system permease
Maltose/maltodextrin transport system permease {ECO:0000313|EMBL:AEN95655.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_047_000M1_scaffold_637_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1438..1701
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G5J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54880.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_047_000M1_scaffold_637_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2268..3626
DNA (1359bp) protein (453aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Roseburia RepID=D4L424_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_637_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4037..4405
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99304.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_047_000M1_scaffold_637_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4499..4909
DNA (411bp) protein (137aa)
FOG: CBS domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L436_9FIRM
FOG: CBS domain
FOG: CBS domain {ECO:0000313|EMBL:CBL14376.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_637_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4900..6228)
DNA (1329bp) protein (443aa)
Putative efflux protein, MATE family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L437_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL14377.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_637_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6364..7197
DNA (834bp) protein (278aa)
Multidrug-efflux transporter 2 regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFV7_9FIRM
Multidrug-efflux transporter 2 regulator {ECO:0000313|EMBL:EEU99302.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted transcriptional regulators
L2_047_000M1_scaffold_637_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7519..8001
DNA (483bp) protein (161aa)
Putative lipoprotein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B614_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CDA54421.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Sporulation and spore germination.
L2_047_000M1_scaffold_637_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7988..8404
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GFV5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54422.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_637_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8462..10132)
DNA (1671bp) protein (557aa)
High affinity sulphate transporter 1 n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KKZ1_9FIRM
high affinity sulphate transporter 1
High affinity sulphate transporter 1 {ECO:0000313|EMBL:CBL07543.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_047_000M1_scaffold_637_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10367..10687
DNA (321bp) protein (107aa)
O-6-methylguanine DNA methyltransferase n=4 Tax=Roseburia RepID=D4KKZ2_9FIRM
O-6-methylguanine DNA methyltransferase
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CBL14382.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_637_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10833..11264
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=4 Tax=Roseburia RepID=D4KKZ3_9FIRM
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBL14383.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_637_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11382..11927
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6BM01_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54427.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_637_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12448..14448
DNA (2001bp) protein (667aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AR14_9FIRM
L2_047_000M1_scaffold_637_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14582..14941)
DNA (360bp) protein (120aa)
Mn-dependent transcriptional regulator n=4 Tax=Roseburia RepID=D4KKZ6_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBL07548.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_047_000M1_scaffold_637_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15216..15305
DNA (90bp) protein (30aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6ATS4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07549.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_047_000M1_scaffold_637_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15374..16639
DNA (1266bp) protein (422aa)
Hemolysins and related proteins containing CBS domains n=3 Tax=Roseburia RepID=D4L448_9FIRM
Hemolysins and related proteins containing CBS domains
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:CDA54431.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_637_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16676..17701)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BM08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54432.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_047_000M1_scaffold_637_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18062..19246
DNA (1185bp) protein (395aa)
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000313|EMBL:CBL14390.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Cysteine desulfurase NifS n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L450_9FIRM
L2_047_000M1_scaffold_637_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19293..19730
DNA (438bp) protein (146aa)
FeS cluster assembly scaffold protein NifU, Clostridium type n=4 Tax=Roseburia RepID=D4KL00_9FIRM
FeS cluster assembly scaffold protein NifU, Clostridium type
FeS cluster assembly scaffold protein NifU Clostridium type {ECO:0000313|EMBL:CDA54434.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_637_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19760..21067
DNA (1308bp) protein (436aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=3 Tax=Roseburia RepID=D4KL01_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EEV01002.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_047_000M1_scaffold_637_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21155..22087
DNA (933bp) protein (311aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=4 Tax=Roseburia RepID=D4KL02_9FIRM
Cysteine synthase A {ECO:0000313|EMBL:CDA54436.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_637_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22275..22952
DNA (678bp) protein (226aa)
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Signal peptidase I . Serine peptidase. MEROPS family S26A n=3 Tax=Roseburia RepID=D4L454_9FIRM
L2_047_000M1_scaffold_637_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23031..24194
DNA (1164bp) protein (388aa)
Cation diffusion facilitator family transporter n=3 Tax=Roseburia RepID=D4L455_9FIRM
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEV01006.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_047_000M1_scaffold_637_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24234..25286
DNA (1053bp) protein (351aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=3 Tax=Roseburia RepID=D4KL05_9FIRM
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:CDA54442.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_637_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25298..27994
DNA (2697bp) protein (899aa)
Signal transduction histidine kinase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL06_9FIRM
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBL07558.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_047_000M1_scaffold_637_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27987..30662
DNA (2676bp) protein (892aa)
EDD domain protein, DegV family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L458_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBL14398.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_637_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31224..32306
DNA (1083bp) protein (361aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=2 Tax=Roseburia RepID=D4KL08_9FIRM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_047_000M1_scaffold_637_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32365..33012
DNA (648bp) protein (216aa)
Riboflavin synthase alpha subunit n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B642_9FIRM
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CDA54446.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
riboflavin synthase alpha chain
Displaying items 1-30 of 31 in total

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