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L2_047_000M1_scaffold_643

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_643_1
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ILN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51253.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_643_2
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(512..1705)
DNA (1194bp) protein (398aa)
Elongation factor Tu n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMK6_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
tuf; elongation factor Tu
L2_047_000M1_scaffold_643_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1806..3902)
DNA (2097bp) protein (699aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Elongation factor G n=1 Tax=Clostridium sp. CAG:217 RepID=R6JND9_9CLOT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_643_4
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3929..4399)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1H3_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
rpsG; 30S ribosomal protein S7
L2_047_000M1_scaffold_643_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4585..5007)
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQN1_9CLOT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
SSU ribosomal protein S12P
L2_047_000M1_scaffold_643_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5213..8860)
DNA (3648bp) protein (1216aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYP4_9CLOT
L2_047_000M1_scaffold_643_7
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8905..12624)
DNA (3720bp) protein (1240aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMK2_9CLOT
L2_047_000M1_scaffold_643_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12984..14627
DNA (1644bp) protein (548aa)
ABC transporter substrate-binding protein family 5 n=1 Tax=Clostridium sp. CAG:217 RepID=R6JND8_9CLOT
ABC transporter substrate-binding protein family 5 {ECO:0000313|EMBL:CDB51542.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ABC-type oligopeptide transport system, periplasmic component
L2_047_000M1_scaffold_643_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14605..15066
DNA (462bp) protein (154aa)
Putative integral membrane protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1H0_9CLOT
Putative integral membrane protein {ECO:0000313|EMBL:CDB51541.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_643_10
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15129..15854
DNA (726bp) protein (242aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQM7_9CLOT
nagB; glucosamine-6-phosphate deaminase
L2_047_000M1_scaffold_643_11
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15879..16334
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51539.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_643_12
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16345..18294
DNA (1950bp) protein (650aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMJ9_9CLOT
L2_047_000M1_scaffold_643_13
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18357..19130
DNA (774bp) protein (258aa)
Hydrolase TatD family n=1 Tax=Clostridium sp. CAG:217 RepID=R6JND3_9CLOT
Hydrolase TatD family {ECO:0000313|EMBL:CDB51537.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
TatD family hydrolase
L2_047_000M1_scaffold_643_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19197..19742)
DNA (546bp) protein (182aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1G6_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB51536.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
transcriptional regulator XRE family
L2_047_000M1_scaffold_643_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19994..22144
DNA (2151bp) protein (717aa)
SH3 type 3 domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQM0_9CLOT
SH3 type 3 domain protein {ECO:0000313|EMBL:CDB51535.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
SH3 type 3 domain-containing protein
L2_047_000M1_scaffold_643_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22200..22415)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51534.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_643_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22449..23054)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51533.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_643_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23363..24121)
DNA (759bp) protein (253aa)
ABC transporter n=1 Tax=Clostridium sp. CAG:217 RepID=R6JND1_9CLOT
ABC transporter {ECO:0000313|EMBL:CDB51532.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L2_047_000M1_scaffold_643_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24118..24936)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1G2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51531.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L2_047_000M1_scaffold_643_20
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24929..25600)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51530.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
srtA; sortase family protein
L2_047_000M1_scaffold_643_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25603..27264)
DNA (1662bp) protein (554aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYN4_9CLOT
L2_047_000M1_scaffold_643_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27407..27634)
DNA (228bp) protein (76aa)
Aldo/keto reductases related to diketogulonate reductase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMJ2_9CLOT
Aldo/keto reductases related to diketogulonate reductase {ECO:0000313|EMBL:CDB51528.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Aldo/keto reductases, related to diketogulonate reductase
L2_047_000M1_scaffold_643_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27647..28027)
DNA (381bp) protein (127aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNC9_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDB51527.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_643_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28549..28905
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51526.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_643_25
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28910..29590
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51525.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_643_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29659..30171)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IYN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51524.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_643_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30269..30925)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IMI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51523.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L2_047_000M1_scaffold_643_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30985..31302)
DNA (318bp) protein (106aa)
TfoX domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JNC5_9CLOT
TfoX domain protein {ECO:0000313|EMBL:CDB51522.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Regulator of competence-specific genes
L2_047_000M1_scaffold_643_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32010..32537)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51521.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
GNAT family acetyltransferase
Displaying 29 items

View Taxonomy