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L2_047_000M1_scaffold_647

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_647_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81736.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_647_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(95..817)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81734.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_647_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(831..1085)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DNF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81733.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_647_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1172..1378)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81731.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_647_5
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1389..2624)
DNA (1236bp) protein (412aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
DNA polymerase IV n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSC2_9FIRM
DNA-directed DNA polymerase
L2_047_000M1_scaffold_647_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2790..3206
DNA (417bp) protein (139aa)
Helix-turn-helix domain protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DNE6_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCX81728.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
transcriptional regulator
L2_047_000M1_scaffold_647_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3504..4049
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82559.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted Zn peptidase
L2_047_000M1_scaffold_647_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4082..4384
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82560.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_647_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4546..6384
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZ91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81321.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_647_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6499..6684
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RVZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38562.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L2_047_000M1_scaffold_647_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6687..7064
DNA (378bp) protein (126aa)
TnpV protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRR2_9FIRM
TnpV protein {ECO:0000313|EMBL:CCX82873.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_647_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7137..7472)
DNA (336bp) protein (112aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QRU9_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDC38560.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_047_000M1_scaffold_647_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7474..7989)
DNA (516bp) protein (172aa)
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVB8_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCX82874.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_647_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7986..8336)
DNA (351bp) protein (117aa)
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRG7_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCX82875.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_647_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8442..9008)
DNA (567bp) protein (189aa)
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E231_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCX82877.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_647_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9049..9960)
DNA (912bp) protein (304aa)
Putative magnesium and cobalt transport protein CorA n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVC3_9FIRM
Putative magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:CCX82879.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Mg2+ and Co2+ transporters
L2_047_000M1_scaffold_647_17
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10345..10539)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38556.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L2_047_000M1_scaffold_647_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10789..13401)
DNA (2613bp) protein (871aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82884.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Cna protein B-type domain.
L2_047_000M1_scaffold_647_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13596..14534)
DNA (939bp) protein (313aa)
ParB-like partition proteins n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E245_9FIRM
ParB-like partition proteins {ECO:0000313|EMBL:CCX82887.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ParB-like partition proteins
L2_047_000M1_scaffold_647_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14491..15315)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82888.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Chromosome partitioning protein parA
L2_047_000M1_scaffold_647_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15847..16026)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82889.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_647_22
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17201..18001
DNA (801bp) protein (267aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=2 Tax=Ruminococcus RepID=D4L522_9FIRM
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBL14717.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_647_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18187..18357
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E407_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82896.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_647_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18485..19360
DNA (876bp) protein (292aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L524_9FIRM
NADP oxidoreductase coenzyme F420-dependent.
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:CBL14719.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_647_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19357..19929
DNA (573bp) protein (191aa)
Dipicolinic acid synthetase B subunit n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRT5_9FIRM
Dipicolinic acid synthetase B subunit {ECO:0000313|EMBL:CCX82898.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_047_000M1_scaffold_647_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20049..21698
DNA (1650bp) protein (550aa)
Dockerin type I repeat n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L525_9FIRM
Dockerin type I repeat.
Dockerin type I repeat {ECO:0000313|EMBL:CBL14720.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_047_000M1_scaffold_647_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21763..21972)
DNA (210bp) protein (70aa)
Transcriptional regulator XRE family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRJ6_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCX82900.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
transcriptional regulator, XRE family
L2_047_000M1_scaffold_647_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22328..22552)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RV65_9FIRM
DNA-binding protein {ECO:0000313|EMBL:KJF38268.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein predicted by Glimmer/Critica
L2_047_000M1_scaffold_647_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22738..23874
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E411_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82901.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_047_000M1_scaffold_647_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24285..24815
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L528_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14723.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 38 in total

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