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L2_047_000M1_scaffold_648

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_648_1
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(169..1764)
DNA (1596bp) protein (532aa)
putative alpha-glucosidase II (EC:3.2.1.20)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DM81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77046.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_047_000M1_scaffold_648_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1786..3942)
DNA (2157bp) protein (719aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Parabacteroides johnsonii RepID=B7B626_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10484.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
putative alpha-N-acetylglucosaminidase
L2_047_000M1_scaffold_648_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3939..5510)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A470_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10483.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_648_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5512..6699)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=3 Tax=Parabacteroides johnsonii RepID=K5YAV8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10482.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glycoside hydrolase
L2_047_000M1_scaffold_648_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6783..8255)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZGB8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10481.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
frrH; putative outer membrane protein
L2_047_000M1_scaffold_648_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8288..11767)
DNA (3480bp) protein (1160aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides johnsonii RepID=K5ZGU7_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN10480.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
frrG; putative outer membrane protein
L2_047_000M1_scaffold_648_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11927..12907)
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z4I3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10479.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
anti-FecI sigma factor FecR
L2_047_000M1_scaffold_648_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13441..13983)
DNA (543bp) protein (181aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=B7B636_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN10477.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_047_000M1_scaffold_648_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14011..17160)
DNA (3150bp) protein (1050aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B637_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98081.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L2_047_000M1_scaffold_648_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17286..18212
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B638_9PORP
riboflavin biosynthesis protein RibF
L2_047_000M1_scaffold_648_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18221..19276
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z4H9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10474.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
acetylornithine deacetylase
L2_047_000M1_scaffold_648_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19345..20634
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A460_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10473.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
O-antigen and teichoic acid export membrane protein
L2_047_000M1_scaffold_648_13
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20680..22011)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DC71_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77790.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
M24/M37 family peptidase
L2_047_000M1_scaffold_648_14
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22013..22852)
DNA (840bp) protein (280aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B642_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10471.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_648_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22845..24578)
DNA (1734bp) protein (578aa)
Tetratricopeptide repeat protein n=2 Tax=Parabacteroides johnsonii RepID=B7B643_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10470.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_648_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24616..25047)
DNA (432bp) protein (144aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=3 Tax=Parabacteroides RepID=B7B644_9PORP
L2_047_000M1_scaffold_648_17
unknown

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comp(25228..25335)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_047_000M1_scaffold_648_18
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25370..26173)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DC76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77795.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
beta-glycosidase
L2_047_000M1_scaffold_648_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26331..27881
DNA (1551bp) protein (517aa)
PglZ domain protein n=2 Tax=Parabacteroides RepID=B7B647_9PORP
PglZ domain protein {ECO:0000313|EMBL:EEC98091.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
two-component system response regulator
L2_047_000M1_scaffold_648_20
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28035..28454
DNA (420bp) protein (140aa)
YjeE family ATPase n=2 Tax=Parabacteroides RepID=K5ZGT3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77797.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
ATPase/GTPase
L2_047_000M1_scaffold_648_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28456..28671
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B649_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98093.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_648_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28737..30917)
DNA (2181bp) protein (727aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Ribonuclease R n=2 Tax=Parabacteroides johnsonii RepID=B7B650_9PORP
ribonuclease R
L2_047_000M1_scaffold_648_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30999..31874)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YAU2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10462.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
regucalcin-like protein
L2_047_000M1_scaffold_648_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32099..32923
DNA (825bp) protein (275aa)
altronate oxidoreductase (EC:1.1.1.58)
Altronate oxidoreductase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZGA1_9PORP
Altronate oxidoreductase {ECO:0000313|EMBL:EKN10461.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Displaying 24 items

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