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L2_047_000M1_scaffold_658

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_658_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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273..527
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25037.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_658_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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538..1392
DNA (855bp) protein (285aa)
EDD domain protein DegV family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q942_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CCZ25038.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DegV family protein
L2_047_000M1_scaffold_658_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1402..2379
DNA (978bp) protein (326aa)
Zn-dependent dipeptidase, microsomal dipeptidase homolog (EC:3.4.13.19)
Renal dipeptidase family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QFG7_9FIRM
Renal dipeptidase family protein {ECO:0000313|EMBL:CCZ25039.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_658_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2479..5646
DNA (3168bp) protein (1056aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25040.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
SNF2-related protein
L2_047_000M1_scaffold_658_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5658..6665)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QS72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25041.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_658_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7094..7780)
DNA (687bp) protein (229aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRK1_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCZ24856.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
N-acetylmuramoyl-L-alanine amidase
L2_047_000M1_scaffold_658_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7818..8375)
DNA (558bp) protein (186aa)
NUDIX hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8F3_9FIRM
NUDIX hydrolase {ECO:0000313|EMBL:CCZ24858.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
NUDIX hydrolase
L2_047_000M1_scaffold_658_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8468..9325
DNA (858bp) protein (286aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Methionine aminopeptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEU4_9FIRM
methionine aminopeptidase
L2_047_000M1_scaffold_658_9
unknown

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comp(9384..9518)
DNA (135bp) protein (45aa)

This feature has no annotations

L2_047_000M1_scaffold_658_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9674..9889
DNA (216bp) protein (72aa)
Site-specific recombinase, phage integrase family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9R6_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEC90506.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
site-specific recombinase
L2_047_000M1_scaffold_658_11
unknown

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9894..10118
DNA (225bp) protein (75aa)

This feature has no annotations

L2_047_000M1_scaffold_658_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10828..12258)
DNA (1431bp) protein (477aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q798_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24428.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_658_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12260..13594)
DNA (1335bp) protein (445aa)
PTS system lactose/cellobiose family IIC component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDN0_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
PTS lactose/cellobiose IIC component
L2_047_000M1_scaffold_658_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13595..13900)
DNA (306bp) protein (102aa)
Beta-glucosides PTS, EIIB (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6R0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24430.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_658_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14224..16824)
DNA (2601bp) protein (867aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24431.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
PTS system transcriptional activator
L2_047_000M1_scaffold_658_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16928..17740)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24432.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
MerR family transcriptional regulator
L2_047_000M1_scaffold_658_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17935..18687
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24433.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_658_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(18977..19369)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQG6_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
SSU ribosomal protein S9P
L2_047_000M1_scaffold_658_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(19381..19818)
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTU9_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
LSU ribosomal protein L13P
L2_047_000M1_scaffold_658_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19959..20150)
DNA (192bp) protein (64aa)
Phage shock protein C PspC n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7B0_9FIRM
Phage shock protein C PspC {ECO:0000313|EMBL:CCZ24438.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
phage shock protein C, PspC
L2_047_000M1_scaffold_658_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20153..20911)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24439.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_658_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20913..21524)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24440.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted membrane protein
L2_047_000M1_scaffold_658_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21517..21843)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24441.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator, PadR family
L2_047_000M1_scaffold_658_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21938..22723)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24442.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
prolyl oligopeptidase family protein
L2_047_000M1_scaffold_658_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22671..22910)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24443.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_658_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23104..23316
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24444.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Helix-turn-helix.
L2_047_000M1_scaffold_658_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23651..24205
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PXW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14552.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Hypothetical protein
L2_047_000M1_scaffold_658_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24288..25181)
DNA (894bp) protein (298aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Homoserine kinase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6S5_9FIRM
homoserine kinase
L2_047_000M1_scaffold_658_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25185..26669)
DNA (1485bp) protein (495aa)
Threonine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQH6_9FIRM
Threonine synthase {ECO:0000313|EMBL:CCZ24446.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
threonine synthase
L2_047_000M1_scaffold_658_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26955..28109
DNA (1155bp) protein (385aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24447.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Displaying items 1-30 of 38 in total

View Taxonomy