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L2_047_000M1_scaffold_681

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_681_1
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..602
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ARF9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58281.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
ORF6N domain.
L2_047_000M1_scaffold_681_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

798..1022
DNA (225bp) protein (75aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HSF6_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CCY31044.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_047_000M1_scaffold_681_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1431..2315
DNA (885bp) protein (295aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HN17_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY31043.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Helix-turn-helix.
L2_047_000M1_scaffold_681_4
unknown

Not on your lists

2305..2532
DNA (228bp) protein (76aa)

This feature has no annotations

L2_047_000M1_scaffold_681_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2529..3110
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I249_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31042.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_047_000M1_scaffold_681_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3232..3789
DNA (558bp) protein (186aa)
Predicted permeases n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2T1_9FIRM
Predicted permeases {ECO:0000313|EMBL:CCY31041.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Predicted permeases
L2_047_000M1_scaffold_681_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4121..5314
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31040.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_681_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5669..6760
DNA (1092bp) protein (364aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Roseburia inulinivorans DSM 16841 PF6_9FIRM">RepID=C0FPF6_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG95529.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
aldo/keto reductase
L2_047_000M1_scaffold_681_9
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6812..7447
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B68B19
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL33746.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L2_047_000M1_scaffold_681_10
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

7483..8370
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ETH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91902.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L2_047_000M1_scaffold_681_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8357..9037
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 PF7_9FIRM">RepID=C0FPF7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG95530.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
two component system response regulator
L2_047_000M1_scaffold_681_12
unknown

Not on your lists

8988..9116
DNA (129bp) protein (43aa)

This feature has no annotations

L2_047_000M1_scaffold_681_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9116..10084
DNA (969bp) protein (323aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
two component system histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 PF8_9FIRM">RepID=C0FPF8_9FIRM
L2_047_000M1_scaffold_681_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10211..10981
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30507.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_047_000M1_scaffold_681_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10971..12980
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30508.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Predicted permease.
L2_047_000M1_scaffold_681_16
unknown

Not on your lists

13070..13210
DNA (141bp) protein (47aa)

This feature has no annotations

L2_047_000M1_scaffold_681_17
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13242..13511
DNA (270bp) protein (90aa)
anthranilate synthase, component I (EC:4.1.3.27)
Chorismate binding enzyme n=1 Tax=Clostridium leptum CAG:27 RepID=R6P3T3_9CLOT
Chorismate binding enzyme {ECO:0000313|EMBL:CDC04632.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_047_000M1_scaffold_681_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13739..15094
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95535.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_681_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15270..16121
DNA (852bp) protein (284aa)
Conserved repeat protein n=2 Tax=Roseburia RepID=C0FPG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30405.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_681_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16261..16866
DNA (606bp) protein (202aa)
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein {ECO:0000313|EMBL:EEG95537.1}; EC=3.1.3.3 {ECO:0000313|EMBL:EEG95537.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPG4_9FIRM
thrH; phosphoserine phosphatase
L2_047_000M1_scaffold_681_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16999..18318)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31285.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Na+-driven multidrug efflux pump
L2_047_000M1_scaffold_681_22
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18416..20020)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVY9_9FIRM
L2_047_000M1_scaffold_681_23
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20027..20173)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93249.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_681_24
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20422..21387
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31287.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_681_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21418..22347
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HNM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31288.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Mg2+ and Co2+ transporters
L2_047_000M1_scaffold_681_26
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22376..22612
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FVY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31289.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_681_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22697..24949
DNA (2253bp) protein (751aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HNI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31290.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_047_000M1_scaffold_681_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25021..25533
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5I2R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31292.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_681_29
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25718..28243
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93242.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_681_30
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28434..28688
DNA (255bp) protein (85aa)
Phosphocarrier, HPr family n=2 Tax=Roseburia RepID=C0FVX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31294.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
phosphotransferase system, HPr-like protein
Displaying items 1-30 of 33 in total

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