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L2_047_000M1_scaffold_692

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_692_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..120
DNA (120bp) protein (40aa)
50S ribosomal protein L21 n=7 Tax=Parabacteroides RepID=A7AKI8_9PORP
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
rplU; 50S ribosomal protein L21
L2_047_000M1_scaffold_692_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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143..409
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=12 Tax=Bacteroidales RepID=RL27_PARD8
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L2_047_000M1_scaffold_692_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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680..1222
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5YH61_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12967.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
lipoprotein
L2_047_000M1_scaffold_692_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1314..2588
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=Parabacteroides johnsonii RepID=B7BCN1_9PORP
Serine-tRNA ligase {ECO:0000313|EMBL:EKN12968.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_047_000M1_scaffold_692_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2581..2712)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCN0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95813.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L2_047_000M1_scaffold_692_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2743..5181)
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZNV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12970.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
pyridine nucleotide-disulfide oxidoreductase
L2_047_000M1_scaffold_692_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5246..5611)
DNA (366bp) protein (122aa)
Transcriptional regulator, MarR family n=3 Tax=Parabacteroides RepID=B7BCM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12971.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L2_047_000M1_scaffold_692_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5836..6813)
DNA (978bp) protein (326aa)
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:EEC95808.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EEC95808.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase 2 n=3 Tax=Parabacteroides RepID=B7BCM5_9PORP
L2_047_000M1_scaffold_692_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6899..7567)
DNA (669bp) protein (223aa)
Pyridoxal phosphate enzyme, YggS family n=3 Tax=Parabacteroides RepID=B7BCM4_9PORP
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EKN12973.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_047_000M1_scaffold_692_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7564..8070)
DNA (507bp) protein (169aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BCM3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95806.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_692_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8362..8823)
DNA (462bp) protein (154aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Nucleoside diphosphate kinase n=3 Tax=Parabacteroides RepID=B7BCM1_9PORP
ndk; nucleoside diphosphate kinase
L2_047_000M1_scaffold_692_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9178..9801)
DNA (624bp) protein (208aa)
Resolvase, N-terminal domain protein n=3 Tax=Parabacteroides RepID=B7BCM0_9PORP
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEC95803.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
mpi; multiple promoter invertase
L2_047_000M1_scaffold_692_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10030..12876
DNA (2847bp) protein (949aa)
GHMP kinase, N-terminal domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCL9_9PORP
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EEC95802.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
fkp; bifunctional fucokinase/L-fucose-1-P-guanylyltransferase
L2_047_000M1_scaffold_692_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12938..14032)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ABB3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79294.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
capsular polysaccharide biosynthesis protein
L2_047_000M1_scaffold_692_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14037..16481)
DNA (2445bp) protein (815aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5ZBF6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12979.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
capsule polysaccharide export protein
L2_047_000M1_scaffold_692_16
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16478..17638)
DNA (1161bp) protein (387aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DRF6_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CCX79292.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_047_000M1_scaffold_692_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17650..18357)
DNA (708bp) protein (236aa)
WecB/TagA/CpsF family glycosyl transferase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZN85_9PORP
WecB/TagA/CpsF family glycosyl transferase {ECO:0000313|EMBL:EKN12981.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glycosyl transferase family protein
L2_047_000M1_scaffold_692_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18347..19555)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCL3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95834.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_692_19
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19552..20613)
DNA (1062bp) protein (354aa)
Glycosyltransferase, group 1 family protein n=2 Tax=Parabacteroides RepID=B7BCL2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79288.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
GlcNAc transferase
L2_047_000M1_scaffold_692_20
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20622..21587)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BCL1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79287.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_692_21
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21578..22198)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BCL0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79285.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_047_000M1_scaffold_692_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22195..23094)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCK9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95830.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_692_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23101..24243)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95829.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_047_000M1_scaffold_692_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24250..25230)
DNA (981bp) protein (327aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEC95828.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEC95828.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCK7_9PORP
beta-1,3-galactosyltransferase
L2_047_000M1_scaffold_692_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25243..26043)
DNA (801bp) protein (267aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEC95827.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEC95827.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCK6_9PORP
glycosyltransferase like 2 family protein
L2_047_000M1_scaffold_692_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26040..27497)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=I8WX29_BACFG
wzx3; putative LPS biosynthesis related flippase
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EXZ95265.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L2_047_000M1_scaffold_692_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27512..28717)
DNA (1206bp) protein (402aa)
Nucleotide sugar dehydrogenase n=2 Tax=Parabacteroides RepID=B7BCK3_9PORP
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EEC95839.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
putative UDP-ManNAc dehydrogenase
L2_047_000M1_scaffold_692_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28732..29868)
DNA (1137bp) protein (379aa)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EEC95838.1}; EC=2.7.8.- {ECO:0000313|EMBL:EEC95838.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Glycosyltransferase, group 4 family n=2 Tax=Parabacteroides RepID=B7BCK2_9PORP
putative LPS biosynthesis glycosyltransferase
Displaying 28 items

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