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L2_047_000M1_scaffold_704

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_704_1
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..252)
DNA (252bp) protein (84aa)
Polygalacturonase (Pectinase) n=3 Tax=Bacteroides RepID=C3PWH7_9BACE
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EEO59676.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
exo-poly-alpha-D-galacturonosidase
L2_047_000M1_scaffold_704_2
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(319..1032)
DNA (714bp) protein (238aa)
ABC transporter related n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TQ81_9STAP
ABC transporter related {ECO:0000313|EMBL:CDC71959.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
hypothetical protein
L2_047_000M1_scaffold_704_3
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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comp(1032..1727)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TVN1_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC71956.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_704_4
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(1905..2738)
DNA (834bp) protein (278aa)
EDD domain protein DegV family n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TEW0_9STAP
EDD domain protein DegV family {ECO:0000313|EMBL:CDC71953.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
degV family protein
L2_047_000M1_scaffold_704_5
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

2858..3367
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TQ68_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC71949.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
TetR family transcriptional regulator
L2_047_000M1_scaffold_704_6
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(3410..4546)
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TI70_9STAP
nagA; N-acetylglucosamine-6-phosphate deacetylase
L2_047_000M1_scaffold_704_7
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(4551..5039)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TVL2_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC71941.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_704_8
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(5039..6646)
DNA (1608bp) protein (536aa)
rasP; Regulator of sigma-W protease RasP (EC:3.4.24.-)
M50 family metallopeptidase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UMC4_9STAP
M50 family metallopeptidase {ECO:0000313|EMBL:CDC71937.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_704_9
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(6660..7658)
DNA (999bp) protein (333aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TET8_9STAP
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_047_000M1_scaffold_704_10
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(7639..7830)
DNA (192bp) protein (64aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TET8_9STAP
L2_047_000M1_scaffold_704_11
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(7830..8735)
DNA (906bp) protein (302aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
cdsA; Phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TI55_9STAP
L2_047_000M1_scaffold_704_12
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(8732..9475)
DNA (744bp) protein (248aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
uppS; UDP pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TET2_9STAP
L2_047_000M1_scaffold_704_13
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(9672..10229)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TI49_9STAP
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
frr; ribosome recycling factor
L2_047_000M1_scaffold_704_14
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(10266..10973)
DNA (708bp) protein (236aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
pyrH; Uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UMA3_9STAP
L2_047_000M1_scaffold_704_15
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(10996..11889)
DNA (894bp) protein (298aa)
Elongation factor Ts n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TVI2_9STAP
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
tsf; translation elongation factor EF-Ts
L2_047_000M1_scaffold_704_16
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists


comp(11915..12805)
DNA (891bp) protein (297aa)
30S ribosomal protein S2 n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TQ30_9STAP
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
rpsB; 30S ribosomal protein S2
L2_047_000M1_scaffold_704_17
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(13041..13520)
DNA (480bp) protein (160aa)
Acetyltransferase GNAT family protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TQ27_9STAP
Acetyltransferase GNAT family protein {ECO:0000313|EMBL:CDC71909.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_704_18
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(13548..14546)
DNA (999bp) protein (333aa)
Tyrosine recombinase XerC n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TI30_9STAP
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
xerC_1; Tyrosine recombinase XerC
L2_047_000M1_scaffold_704_19
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(14561..15874)
DNA (1314bp) protein (438aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UM79_9STAP
tRNA (uracil-5-)-methyltransferase Gid
L2_047_000M1_scaffold_704_20
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(16009..16188)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TVG4_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC71901.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L2_047_000M1_scaffold_704_21
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(16206..18422)
DNA (2217bp) protein (739aa)
Ferrous iron transport protein B n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TQ18_9STAP
Ferrous iron transport protein B {ECO:0000313|EMBL:CDC71899.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
ferrous iron transporter FeoB
L2_047_000M1_scaffold_704_22
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(18422..18655)
DNA (234bp) protein (78aa)
FeoA domain protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UM74_9STAP
FeoA domain protein {ECO:0000313|EMBL:CDC71897.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
Fe2+ transport system protein A
L2_047_000M1_scaffold_704_23
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(18683..18898)
DNA (216bp) protein (72aa)
Fe2+ transport system protein A n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TVF7_9STAP
Fe2+ transport system protein A {ECO:0000313|EMBL:CDC71896.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
Fe2+ transport system protein A
L2_047_000M1_scaffold_704_24
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

19365..19727
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TQ12_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC71894.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
Mn-dependent transcriptional regulator
L2_047_000M1_scaffold_704_25
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(19754..20227)
DNA (474bp) protein (158aa)
Cell wall hydrolase SleB n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UM69_9STAP
Cell wall hydrolase SleB {ECO:0000313|EMBL:CDC71892.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
sleB1; spore cortex-lytic enzyme SleB
L2_047_000M1_scaffold_704_26
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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20509..20790
DNA (282bp) protein (94aa)
Transcription regulator phage-related protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TQ07_9STAP
Transcription regulator phage-related protein {ECO:0000313|EMBL:CDC71889.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
DNA-binding protein
L2_047_000M1_scaffold_704_27
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(20843..22753)
DNA (1911bp) protein (637aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
thrZ; Threonine--tRNA ligase 2 (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TVE6_9STAP
L2_047_000M1_scaffold_704_28
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(23100..23978)
DNA (879bp) protein (293aa)
DnaI n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UM58_9STAP
DnaI {ECO:0000313|EMBL:CDC71882.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
dnaI; primosomal protein DnaI
L2_047_000M1_scaffold_704_29
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(23982..25280)
DNA (1299bp) protein (433aa)
Replication initiation and membrane attachment family protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TPZ7_9STAP
Replication initiation and membrane attachment family protein {ECO:0000313|EMBL:CDC71879.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
dnaB1; Replication initiation and membrane attachment protein DnaB
L2_047_000M1_scaffold_704_30
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(25273..25644)
DNA (372bp) protein (124aa)
Conserved domain protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UM54_9STAP
Conserved domain protein {ECO:0000313|EMBL:CDC71877.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
Displaying items 1-30 of 39 in total

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