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L2_047_000M1_scaffold_731

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_731_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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258..1910
DNA (1653bp) protein (551aa)
ABC transporter ATP-binding protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCA6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ23934.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC transporter ATP-binding protein
L2_047_000M1_scaffold_731_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2289..3119
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5W8_9FIRM
L2_047_000M1_scaffold_731_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3130..3834
DNA (705bp) protein (235aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|SAAS:SAAS00023632};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.89)
2 3 4 5-tetrahydropyridine-2 6-dicarboxylate N-acetyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSG6_9FIRM
L2_047_000M1_scaffold_731_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3844..4974
DNA (1131bp) protein (377aa)
amidohydrolase (EC:3.5.1.32)
Amidohydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QP04_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CCZ23931.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_731_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4977..6158
DNA (1182bp) protein (394aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Acetylornithine aminotransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q593_9FIRM
acetylornithine aminotransferase
L2_047_000M1_scaffold_731_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6222..8267
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23929.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_731_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8257..8718
DNA (462bp) protein (154aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Endoribonuclease YbeY n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5W1_9FIRM
metalloprotease
L2_047_000M1_scaffold_731_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8724..9119
DNA (396bp) protein (132aa)
Cytidine deaminase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSF9_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CCZ23927.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cytidine deaminase
L2_047_000M1_scaffold_731_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9119..10012
DNA (894bp) protein (298aa)
GTPase Era n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QP00_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
era; GTP-binding protein Era
L2_047_000M1_scaffold_731_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10002..10751
DNA (750bp) protein (250aa)
DNA repair protein RecO n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q588_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DNA repair protein RecO
L2_047_000M1_scaffold_731_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10748..12661
DNA (1914bp) protein (638aa)
UPF0313 protein BN550_01541 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QC95_9FIRM
UPF0313 protein BN550_01541 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Fe-S oxidoreductase
L2_047_000M1_scaffold_731_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12658..13569
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23923.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Lysophospholipase
L2_047_000M1_scaffold_731_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13689..15062
DNA (1374bp) protein (458aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
glyS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QSF2_9FIRM
L2_047_000M1_scaffold_731_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15077..16828
DNA (1752bp) protein (584aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DNA primase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNZ6_9FIRM
dnaG; DNA primase
L2_047_000M1_scaffold_731_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16832..18073
DNA (1242bp) protein (414aa)
RNA polymerase sigma factor SigA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q584_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
sigA; RNA polymerase sigma factor RpoD
L2_047_000M1_scaffold_731_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18075..18761
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QC88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23919.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
SAM-dependent methyltransferase
L2_047_000M1_scaffold_731_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18748..19506
DNA (759bp) protein (253aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5U9_9FIRM
hypothetical protein
L2_047_000M1_scaffold_731_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(19535..20386)
DNA (852bp) protein (284aa)
Cof-like hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU50_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ24502.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD-superfamily hydrolase, subfamily IIB
L2_047_000M1_scaffold_731_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20494..21861
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQQ4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ24501.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
efflux protein
L2_047_000M1_scaffold_731_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(21858..22787)
DNA (930bp) protein (310aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q703_9FIRM
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
L2_047_000M1_scaffold_731_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22808..23101)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24499.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_047_000M1_scaffold_731_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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23214..23624
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24498.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_731_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(23616..24581)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24497.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_047_000M1_scaffold_731_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24602..25516)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43205.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_047_000M1_scaffold_731_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25467..26240)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34225.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_047_000M1_scaffold_731_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26237..26848)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34226.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
pyridoxamine 5'-phosphate oxidase
L2_047_000M1_scaffold_731_27
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26850..27914)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WRV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73704.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Predicted Fe-S oxidoreductases
L2_047_000M1_scaffold_731_28
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27942..28085)
DNA (144bp) protein (48aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WRV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73703.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L2_047_000M1_scaffold_731_29
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28298..28618
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WRV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73702.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
HxlR family transcriptional regulator
L2_047_000M1_scaffold_731_30
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28710..29240)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WRV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73701.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
Displaying 30 items

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