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L2_047_000M1_scaffold_732

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_732_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..127
DNA (126bp) protein (42aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2Y0_9FIRM
ybaK/ebsC protein
L2_047_000M1_scaffold_732_2
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(211..1125)
DNA (915bp) protein (305aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G8I3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56421.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1216..3897)
DNA (2682bp) protein (894aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:CBL08720.1}; EC=3.6.3.8 {ECO:0000313|EMBL:CBL08720.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=2 Tax=Roseburia intestinalis RepID=D4KPB8_9FIRM
L2_047_000M1_scaffold_732_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3996..5684)
DNA (1689bp) protein (563aa)
Methyl-accepting chemotaxis protein n=2 Tax=Roseburia intestinalis RepID=D4L2X5_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL13965.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Methyl-accepting chemotaxis protein
L2_047_000M1_scaffold_732_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5864..5962)
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B5V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56424.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6226..8430)
DNA (2205bp) protein (735aa)
Glycosidases (EC:3.2.1.20)
Alpha amylase, catalytic domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8H6_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEV01923.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_047_000M1_scaffold_732_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8698..10575
DNA (1878bp) protein (626aa)
HD domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BBC0_9FIRM
HD domain protein {ECO:0000313|EMBL:CDA56426.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_047_000M1_scaffold_732_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10846..12537)
DNA (1692bp) protein (564aa)
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000, ECO:0000313|EMBL:CBL13963.1}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979, ECO:0000313|EMBL:CBL13963.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Sulfate adenylyltransferase subunit 1 n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2X3_9FIRM
L2_047_000M1_scaffold_732_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12538..13437)
DNA (900bp) protein (300aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064, ECO:0000313|EMBL:CBL13962.1}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064, ECO:0000313|EMBL:CBL13962.1};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Sulfate adenylyltransferase subunit 2 n=4 Tax=Roseburia RepID=D4KPB5_9FIRM
L2_047_000M1_scaffold_732_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13466..13780)
DNA (315bp) protein (105aa)
Ferredoxin n=2 Tax=Roseburia RepID=R6B5V8_9FIRM
Putative adenylylsulfate reductase, beta subunit {ECO:0000313|EMBL:EEV01918.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_047_000M1_scaffold_732_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13777..15579)
DNA (1803bp) protein (601aa)
Putative adenylylsulfate reductase, alpha subunit n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8H0_9FIRM
Putative adenylylsulfate reductase, alpha subunit {ECO:0000313|EMBL:EEV01917.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L2_047_000M1_scaffold_732_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15590..16678)
DNA (1089bp) protein (363aa)
Sulfate-transporting ATPase {ECO:0000256|SAAS:SAAS00085229}; EC=3.6.3.25 {ECO:0000256|SAAS:SAAS00085229};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
sulfate ABC transporter, ATP-binding protein (EC:3.6.3.25)
Sulfate ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8G9_9FIRM
L2_047_000M1_scaffold_732_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16813..17628)
DNA (816bp) protein (272aa)
Sulfate ABC transporter, permease protein CysW n=2 Tax=Roseburia intestinalis RepID=D4KPB3_9FIRM
sulfate ABC transporter, permease protein CysW
Sulfate ABC transporter, permease protein CysW {ECO:0000313|EMBL:CBL08715.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_047_000M1_scaffold_732_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17730..18566)
DNA (837bp) protein (279aa)
Sulfate ABC transporter, permease protein CysT n=3 Tax=Roseburia RepID=D4KPB2_9FIRM
sulfate ABC transporter, permease protein CysT
Sulfate ABC transporter permease protein CysT {ECO:0000313|EMBL:CDA56434.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18584..19645)
DNA (1062bp) protein (354aa)
Sulfate/thiosulfate-binding protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPB1_9FIRM
sulfate/thiosulfate-binding protein
Sulfate-binding protein {ECO:0000313|EMBL:CDA56435.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20118..21944)
DNA (1827bp) protein (609aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Roseburia RepID=C7G8G4_9FIRM
ATP-dependent metalloprotease FtsH
L2_047_000M1_scaffold_732_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21958..22488)
DNA (531bp) protein (177aa)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Roseburia RepID=C7G8G3_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDA56438.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypoxanthine phosphoribosyltransferase
L2_047_000M1_scaffold_732_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22478..23983)
DNA (1506bp) protein (502aa)
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KPB0_9FIRM
L2_047_000M1_scaffold_732_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23984..25825)
DNA (1842bp) protein (614aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CBL08711.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CBL08711.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Stage II sporulation protein E (SpoIIE) n=4 Tax=Roseburia RepID=D4KPA9_9FIRM
L2_047_000M1_scaffold_732_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25837..26031)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2W5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13955.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_000M1_scaffold_732_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26147..27136
DNA (990bp) protein (330aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=2 Tax=Roseburia RepID=D4KPA8_9FIRM
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) {ECO:0000313|EMBL:CDA56443.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27209..27511)
DNA (303bp) protein (101aa)
Septum formation initiator n=4 Tax=Roseburia RepID=D4KPA7_9FIRM
Septum formation initiator.
Septum formation initiator {ECO:0000313|EMBL:CBL08709.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_047_000M1_scaffold_732_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27574..28029)
DNA (456bp) protein (152aa)
Spore cortex protein YabQ (Spore_YabQ) n=3 Tax=Roseburia RepID=D4KPA6_9FIRM
Spore cortex protein YabQ (Spore_YabQ).
Spore cortex protein YabQ (Spore_YabQ) {ECO:0000313|EMBL:CDA56445.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28026..28316)
DNA (291bp) protein (97aa)
Sporulation protein YabP n=4 Tax=Roseburia RepID=D4KPA5_9FIRM
sporulation protein YabP
Sporulation protein YabP {ECO:0000313|EMBL:CDA56446.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28389..28631)
DNA (243bp) protein (81aa)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) n=4 Tax=Roseburia RepID=D4KPA4_9FIRM
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) {ECO:0000313|EMBL:CDA56447.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28697..28972)
DNA (276bp) protein (92aa)
Bacterial nucleoid DNA-binding protein n=4 Tax=Roseburia RepID=D4KPA3_9FIRM
Bacterial nucleoid DNA-binding protein
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CDA56448.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_047_000M1_scaffold_732_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28974..29159)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7G8F3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08704.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Displaying 27 items

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