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L2_047_000M1_scaffold_734

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_734_1
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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565..981
DNA (417bp) protein (139aa)
XRE family transcriptional regulator n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037B8525
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERT61980.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Cro/CI family transcriptional regulator
L2_047_000M1_scaffold_734_2
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1092..3608
DNA (2517bp) protein (839aa)
Uncharacterized protein n=9 Tax=Escherichia RepID=L2XM60_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AKH95422.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
nlaIIIM; Adenine-specific methyltransferase NlaIII
L2_047_000M1_scaffold_734_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3613..5331
DNA (1719bp) protein (573aa)
Type II restriction-modification system restriction subunit (EC:3.1.21.3)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium sp. L2-50 RepID=A7VF17_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDO57768.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L2_047_000M1_scaffold_734_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5333..6844
DNA (1512bp) protein (504aa)
LlaJI restriction endonuclease n=1 Tax=Clostridium sp. L2-50 RepID=A7VF18_9CLOT
Type II restriction-modification system restriction subunit
Type II restriction-modification system restriction subunit {ECO:0000313|EMBL:CCO04003.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_000M1_scaffold_734_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6877..7881
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G1T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR48452.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
toxin Fic
L2_047_000M1_scaffold_734_6
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8056..8268)
DNA (213bp) protein (71aa)
XRE family transcriptional regulator (Fragment) n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=D7PJP5_9FIRM
XRE family transcriptional regulator {ECO:0000313|EMBL:ADF57344.1}; Flags: Fragment;; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_734_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8332..9216)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94632.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_734_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9653..10303
DNA (651bp) protein (217aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EEG94634.1}; EC=5.4.99.- {ECO:0000313|EMBL:EEG94634.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
RNA pseudouridine synthase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRW6_9FIRM
L2_047_000M1_scaffold_734_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10624..12402
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I2S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31036.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Methyl-accepting chemotaxis protein
L2_047_000M1_scaffold_734_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12471..15767
DNA (3297bp) protein (1099aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31035.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_734_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15764..17104
DNA (1341bp) protein (447aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.4.- 3.1.3.-)
HDIG domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRX0_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EEG94638.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_734_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17170..18156
DNA (987bp) protein (329aa)
Spore coat protein, CotS family n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRX1_9FIRM
Spore coat protein, CotS family {ECO:0000313|EMBL:EEG94639.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
spore coat protein, CotS family
L2_047_000M1_scaffold_734_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18436..19671
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I243_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY31032.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_047_000M1_scaffold_734_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19926..21659
DNA (1734bp) protein (578aa)
alpha-phosphoglucomutase (EC:5.4.2.8 5.4.2.2)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRX3_9FIRM
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EEG94641.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_734_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21807..22082
DNA (276bp) protein (92aa)
DNA-binding protein HU n=2 Tax=Roseburia RepID=C0FRX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30059.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Bacterial nucleoid DNA-binding protein
L2_047_000M1_scaffold_734_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22230..22472
DNA (243bp) protein (81aa)
S4 domain protein n=2 Tax=Roseburia RepID=C0FRX5_9FIRM
S4 domain protein {ECO:0000313|EMBL:EEG94643.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_047_000M1_scaffold_734_17
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22632..22919
DNA (288bp) protein (96aa)
Sporulation protein YabP n=2 Tax=Roseburia RepID=C0FRX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30061.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
sporulation protein YabP
L2_047_000M1_scaffold_734_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22919..23431
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30062.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Spore cortex protein YabQ (Spore_YabQ).
L2_047_000M1_scaffold_734_19
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23456..23761
DNA (306bp) protein (102aa)
Septum formation initiator n=2 Tax=Roseburia RepID=C0FRX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30063.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Septum formation initiator.
L2_047_000M1_scaffold_734_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23843..24835)
DNA (993bp) protein (331aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRX9_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG94647.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L2_047_000M1_scaffold_734_21
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25660..27504
DNA (1845bp) protein (615aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Putative stage II sporulation protein E n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRY0_9FIRM
Putative stage II sporulation protein E {ECO:0000313|EMBL:EEG94648.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_047_000M1_scaffold_734_22
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27505..28968
DNA (1464bp) protein (488aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRY1_9FIRM
L2_047_000M1_scaffold_734_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28949..29485
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HPM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30039.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypoxanthine phosphoribosyltransferase
L2_047_000M1_scaffold_734_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29498..31339
DNA (1842bp) protein (614aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRY3_9FIRM
ATP-dependent metalloprotease FtsH
Displaying 24 items

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