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L2_047_000M1_scaffold_739

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_739_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35..883)
DNA (849bp) protein (283aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAD4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01600.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(867..1601)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9T6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01599.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1613..2134)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAD2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01598.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2121..2666)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T4_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL01597.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2839..3801
DNA (963bp) protein (321aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAD0_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_739_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3855..4754)
DNA (900bp) protein (300aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T3_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB {ECO:0000313|EMBL:CBL01596.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4770..5402)
DNA (633bp) protein (211aa)
Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T2_9FIRM
electron transport complex, RnfABCDGE type, A subunit
Electron transport complex, RnfABCDGE type, A subunit {ECO:0000313|EMBL:CBL01595.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5404..6069)
DNA (666bp) protein (222aa)
Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T1_9FIRM
electron transport complex, RnfABCDGE type, E subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6087..6641)
DNA (555bp) protein (185aa)
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9T0_9FIRM
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG {ECO:0000313|EMBL:CBL01593.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6638..7597)
DNA (960bp) protein (320aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAC5_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
electron transport complex, RnfABCDGE type, D subunit
L2_047_000M1_scaffold_739_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7597..8913)
DNA (1317bp) protein (439aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAC4_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
electron transport complex, RnfABCDGE type, C subunit
L2_047_000M1_scaffold_739_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9234..9359
DNA (126bp) protein (42aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAC3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01591.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9482..10087)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21998.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_047_000M1_scaffold_739_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10503..11039)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAB9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP21995.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_739_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11044..12921)
DNA (1878bp) protein (626aa)
Predicted glycosyltransferases n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S5_9FIRM
Predicted glycosyltransferases
Predicted glycosyltransferases {ECO:0000313|EMBL:CBL01588.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12923..13666)
DNA (744bp) protein (248aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S4_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP21993.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_739_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13679..14470)
DNA (792bp) protein (264aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S3_9FIRM
ABC-type polysaccharide/polyol phosphate export systems, permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_739_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14495..15061)
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDP21991.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDP21991.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K9S2_9FIRM
L2_047_000M1_scaffold_739_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15131..16462)
DNA (1332bp) protein (444aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBL01584.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBL01584.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9S1_9FIRM
L2_047_000M1_scaffold_739_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16544..17137)
DNA (594bp) protein (198aa)
Phosphopantothenoylcysteine synthetase/decarboxylase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9S0_9FIRM
Phosphopantothenoylcysteine synthetase/decarboxylase
Phosphopantothenoylcysteine synthetase/decarboxylase {ECO:0000313|EMBL:CBL01583.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17134..17928)
DNA (795bp) protein (265aa)
Putative dipicolinic acid synthetase, A subunit n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAB2_9FIRM
Putative dipicolinic acid synthetase, A subunit {ECO:0000313|EMBL:EDP21988.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
L2_047_000M1_scaffold_739_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18071..20650)
DNA (2580bp) protein (860aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI79_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ07124.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Signal transduction histidine kinase
L2_047_000M1_scaffold_739_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20640..21467)
DNA (828bp) protein (276aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI78_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFQ07123.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_047_000M1_scaffold_739_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21485..22360)
DNA (876bp) protein (292aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA7_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDP21982.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_000M1_scaffold_739_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22338..22562)
DNA (225bp) protein (75aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA7_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDP21982.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_739_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22520..23356)
DNA (837bp) protein (279aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA7_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDP21982.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_739_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23691..23783)
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9R6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01579.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24047..25333)
DNA (1287bp) protein (429aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBL01578.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBL01578.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Enolase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9R5_9FIRM
L2_047_000M1_scaffold_739_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25697..27118
DNA (1422bp) protein (474aa)
MATE efflux family protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SAA1_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL01577.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_000M1_scaffold_739_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27392..28603
DNA (1212bp) protein (404aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAA0_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDP21976.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ABC-type branched-chain amino acid transport systems, periplasmic component
Displaying items 1-30 of 31 in total

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